RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ZFR2Q9UPR6 939 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 SORCS3Q9UPU3 1222 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 UBE2J1Q9Y385 318 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 CHRNA1P02708 482 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 SLC6A4P31645 630 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 GGT2P36268 569 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 INTS5Q6P9B9 1019 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ALDH16A1Q8IZ83 802 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 PRR18Q8N4B5 295 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 DTX3Q8N9I9 347 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 MAPK15Q8TD08 544 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 CHRAC1Q9NRG0 131 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ZC3H13Q5T200 1668 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 IFNA1P01562 189 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 AOC1P19801 751 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 TSTQ16762 297 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 CDNFQ49AH0 187 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 SWT1Q5T5J6 900 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 FUKQ8N0W3 1084 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF619Q8N2I2 560 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 TLR10Q9BXR5 811 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 POLR2J2Q9GZM3 115 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 SMG9Q9H0W8 520 aaKnown RBP6.69□□□□□ -1.34
SYNE2-216ENST00000555002 DPAGT1Q9H3H5 408 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 SLCO1B3Q9NPD5 702 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 GPRC5BQ9NZH0 403 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 CDH10Q9Y6N8 788 aa6.69□□□□□ -1.34
SYNE2-216ENST00000555002 FAM170BA6NMN3 283 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 TGFB1P01137 390 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 ZBTB48P10074 688 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SLC2A1P11166 492 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 RHOQP17081 205 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 HOXB6P17509 224 aaKnown RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 ARRB1P49407 418 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF136P52737 540 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 EOGTQ5NDL2 527 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SLC35F1Q5T1Q4 408 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SAMD14Q8IZD0 417 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 PYROXD2Q8N2H3 581 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 OR5B17Q8NGF7 314 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 OR56A1Q8NGH5 318 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 DNAJC27Q9NZQ0 273 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 TREHO43280 583 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SEC14L5O43304 696 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SOX2P48431 317 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 AUHQ13825 339 aaKnown RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SLC39A4Q6P5W5 647 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 CERS6Q6ZMG9 384 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 DPY19L3Q6ZPD9 716 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 C12orf45Q8N5I9 185 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SLC35C1Q96A29 364 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 TGM7Q96PF1 710 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 CSPG4P5Q96PW8 444 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 FLRT1Q9NZU1 646 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 MYEF2Q9P2K5 600 aaKnown RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 EDARQ9UNE0 448 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 TCRBV21S2A2A0A5A6 115 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 FAM221BA6H8Z2 402 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 TP53I11O14683 189 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 H1F0P07305 194 aaKnown RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 DLSTP36957 453 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 NRIP1P48552 1158 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 VARS2Q5ST30 1063 aaKnown RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 C6orf183Q5T699 404 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 DUS1LQ6P1R4 473 aaKnown RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 AQP11Q8NBQ7 271 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 CDK15Q96Q40 435 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 AMBNQ9NP70 447 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 ZNF282Q9UDV7 671 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 CA14Q9ULX7 337 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 NAALAD2Q9Y3Q0 740 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 ADAP00813 363 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 LCN1P31025 176 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 KDELC1Q6UW63 502 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SLC26A9Q7LBE3 791 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 LGI4Q8N135 537 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 OR8K5Q8NH50 307 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 IL31RAQ8NI17 732 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 GEMIN6Q8WXD5 167 aaKnown RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SGCZQ96LD1 299 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SULT4A1Q9BR01 284 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 TIMMDC1Q9NPL8 285 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 KCNK6Q9Y257 313 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 EDDM13A0A1B0GTR0 161 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 LCHNA4D1U4 455 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 INHAP05111 366 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 MMP14P50281 582 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 LIMK2P53671 638 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 SEC23AQ15436 765 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 DPYSL2Q16555 572 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 TMEM225Q6GV28 225 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 PLPPR4Q7Z2D5 763 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 GPR137CQ8N3F9 429 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 EIF5A2Q9GZV4 153 aaKnown RBP6.68□□□□□ -1.34
SYNE2-216ENST00000555002 CEP290O15078 2479 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 A0A1W2PRB8 838 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 A0A1W2PRU2 124 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 TSHRP16473 764 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 STEAP3Q658P3 488 aa6.68□□□□□ -1.34
SYNE2-216ENST00000555002 PDSS2Q86YH6 399 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms