RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 ZNF764Q96H86 408 aaPredicted RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 NAF1Q96HR8 494 aaKnown RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 ITCHQ96J02 903 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 KCTD14Q9BQ13 255 aaPredicted RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 TMEM168Q9H0V1 697 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 POLMQ9NP87 494 aaPredicted RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 AGPAT4Q9NRZ5 378 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 TRNAU1APQ9NX07 287 aaKnown RBP8.53□□□□□ -1.04
TDP1-210ENST00000554976 HEBP2Q9Y5Z4 205 aa8.53□□□□□ -1.04
TDP1-210ENST00000554976 LRATO95237 230 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 TGFB1P01137 390 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 SEMG1P04279 462 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 NCK1P16333 377 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 ZNF26P17031 533 aaPredicted RBP8.52□□□□□ -1.05
TDP1-210ENST00000554976 AKT2P31751 481 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 S100A3P33764 101 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 GRIA3P42263 894 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 ASMTP46597 345 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 RABIFP47224 123 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 TRPC1P48995 793 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 CCR8P51685 355 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 MVDP53602 400 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 UBE2IP63279 158 aaKnown RBP8.52□□□□□ -1.05
TDP1-210ENST00000554976 ZNF763Q0D2J5 394 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 FZD2Q14332 565 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 KHDRBS2Q5VWX1 349 aaKnown RBP8.52□□□□□ -1.05
TDP1-210ENST00000554976 Q6ZSR6 202 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 ERMP1Q7Z2K6 904 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 PROSER1Q86XN7 944 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 ANKFN1Q8N957 763 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 OR2L3Q8NG85 312 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 CANT1Q8WVQ1 401 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 OR51B5Q9H339 312 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 XKR8Q9H6D3 395 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 COPS7BQ9H9Q2 264 aaPredicted RBP8.52□□□□□ -1.05
TDP1-210ENST00000554976 SPHK1Q9NYA1 384 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 WNT16Q9UBV4 365 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 CA14Q9ULX7 337 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 CYP8B1Q9UNU6 501 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 DMTF1Q9Y222 760 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 AP4S1Q9Y587 144 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 MYO9BQ13459 2157 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 TRBC2A0A5B9 178 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 FEZF1A0PJY2 475 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 RNASET2O00584 256 aaKnown RBP8.52□□□□□ -1.05
TDP1-210ENST00000554976 PRSS23O95084 383 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 ANXA4P09525 319 aaPredicted RBP8.52□□□□□ -1.05
TDP1-210ENST00000554976 ZCCHC18P0CG32 403 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 BMP2P12643 396 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 HOXB3P14651 431 aaPredicted RBP8.52□□□□□ -1.05
TDP1-210ENST00000554976 PTX3P26022 381 aaPredicted RBP8.52□□□□□ -1.05
TDP1-210ENST00000554976 CD6P30203 668 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 BCL6P41182 706 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 AQP4P55087 323 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 ACSM2AQ08AH3 577 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 DDX39BQ13838 428 aaKnown RBP8.52□□□□□ -1.05
TDP1-210ENST00000554976 HKDC1Q2TB90 917 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 KIAA1614Q5VZ46 1190 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 ACSM2BQ68CK6 577 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 GPR153Q6NV75 609 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 IKBIPQ70UQ0 350 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 Q7L0L9 218 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 SPATA24Q86W54 205 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 LRTOMTQ8WZ04 291 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 NELL1Q92832 810 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 CLDN23Q96B33 292 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 KLHL4Q9C0H6 718 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 BHLHE41Q9C0J9 482 aaPredicted RBP8.52□□□□□ -1.05
TDP1-210ENST00000554976 TCEAL2Q9H3H9 227 aaPredicted RBP8.52□□□□□ -1.05
TDP1-210ENST00000554976 LMAN1LQ9HAT1 526 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 OLAHQ9NV23 265 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 IMP3Q9NV31 184 aaKnown RBP8.52□□□□□ -1.05
TDP1-210ENST00000554976 ZNF639Q9UID6 485 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 MAGEL2Q9UJ55 1249 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 PCDHB11Q9Y5F2 797 aa8.52□□□□□ -1.05
TDP1-210ENST00000554976 A0A0A6YYD5 115 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 SPTY2D1-AS1A0A0U1RR47 76 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 A0A1W2PPC4 97 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 A0A1W2PR77 199 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 BAG2O95816 211 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ABCB1P08183 1280 aaPredicted RBP8.51□□□□□ -1.05
TDP1-210ENST00000554976 GPX2P18283 190 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 KIR3DL1P43629 444 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 LRRC32Q14392 662 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ADRM1Q16186 407 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 NKG7Q16617 165 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 HIST2H2ACQ16777 129 aaPredicted RBP8.51□□□□□ -1.05
TDP1-210ENST00000554976 DEPDC1Q5TB30 811 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 HIST2H2AA3Q6FI13 130 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ANKRD26P1Q6NSI1 321 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 IZUMO2Q6UXV1 221 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 SERPINA11Q86U17 422 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 EPHX4Q8IUS5 362 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 CLECL1Q8IZS7 167 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 KRT78Q8N1N4 520 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 SDR16C5Q8N3Y7 309 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ADCY4Q8NFM4 1077 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 STARD8Q92502 1023 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 GFM2Q969S9 779 aaKnown RBP8.51□□□□□ -1.05
TDP1-210ENST00000554976 MTERF3Q96E29 417 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms