RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 CD300AQ9UGN4 299 aa10.72□□□□□ -0.69
SHMT2-216ENST00000554975 TRPS1Q9UHF7 1281 aa10.72□□□□□ -0.69
SHMT2-216ENST00000554975 AP4S1Q9Y587 144 aa10.72□□□□□ -0.69
SHMT2-216ENST00000554975 SETD2Q9BYW2 2564 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-216ENST00000554975 IGHV5-10-1A0A0J9YXX1 117 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 LOC101059948A0A1B0GTJ6 334 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 SMIM31A0A1B0GVY4 71 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 ATP6AP2A0A1C7CYW4 349 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 B4DGG1 531 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 SLC28A1O00337 649 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 E2F3O00716 465 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 HNRNPRO43390 633 aaKnown RBP10.71□□□□□ -0.69
SHMT2-216ENST00000554975 RGS14O43566 566 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 RAD1O60671 282 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 ATP6AP2O75787 350 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 RECQL5O94762 991 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-216ENST00000554975 RASGRP1O95267 797 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 TNFAIP8O95379 198 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 UMPSP11172 480 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 CTPS1P17812 591 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 DCTP40126 519 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 ARL1P40616 181 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-216ENST00000554975 KCNC1P48547 511 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 BLKP51451 505 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 CHN2P52757 468 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 OR1D5P58170 312 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 SRP54P61011 504 aaKnown RBP10.71□□□□□ -0.69
SHMT2-216ENST00000554975 KLRB1Q12918 225 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 RALGDSQ12967 914 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 GTF2H2Q13888 395 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 NFYCQ13952 458 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 ARHGEF7Q14155 803 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 ZFHX3Q15911 3703 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 WSCD2Q2TBF2 565 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 DEFB109BQ30KR1 87 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 AMZ1Q400G9 498 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 SFT2D3Q587I9 215 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 FHL5Q5TD97 284 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 TMEM164Q5U3C3 297 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 LPCAT4Q643R3 524 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 GTF2H2CQ6P1K8 395 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 PAOXQ6QHF9 649 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 FAM151BQ6UXP7 276 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 LIPIQ6XZB0 460 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 FKBP9P1Q75LS8 142 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 SYVN1Q86TM6 617 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 TICAM1Q8IUC6 712 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 GLB1L3Q8NCI6 653 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-216ENST00000554975 OR6C4Q8NGE1 309 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 DNAJB8Q8NHS0 232 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 CCL4L1Q8NHW4 92 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 GPBAR1Q8TDU6 330 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 ATP6V1E2Q96A05 226 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 EME1Q96AY2 570 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 SLC45A3Q96JT2 553 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 CCDC74BQ96LY2 380 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 TAAR9Q96RI9 348 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 MCCC1Q96RQ3 725 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-216ENST00000554975 EGFL8Q99944 293 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 OSBPL11Q9BXB4 747 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 BPIFA1Q9NP55 256 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 SARS2Q9NP81 518 aaKnown RBP10.71□□□□□ -0.69
SHMT2-216ENST00000554975 ARMC1Q9NVT9 282 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 SMOXQ9NWM0 555 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 ASIC5Q9NY37 505 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 ZDHHC3Q9NYG2 299 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 PKD2L2Q9NZM6 624 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 OPTCQ9UBM4 332 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 MAGEL2Q9UJ55 1249 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 BTRCQ9Y297 605 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 PPIL1Q9Y3C6 166 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 OR1A2Q9Y585 309 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 PCDHGA3Q9Y5H0 932 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 SNX13Q9Y5W8 968 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 GPR45Q9Y5Y3 372 aa10.71□□□□□ -0.69
SHMT2-216ENST00000554975 CCDC154A6NI56 674 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 AGAP14A8MT82 685 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 SLC22A3O75751 556 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 C8GP07360 202 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 OR56A5P0C7T3 313 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 UBTFL6P0CB48 400 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-216ENST00000554975 PRSS56P0CW18 603 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 MPC1LP0DKB6 136 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 PNLIPP16233 465 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 TSPAN8P19075 237 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 CAPN3P20807 821 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 IL10P22301 178 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 JAK1P23458 1154 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 HTR1BP28222 390 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 MAPK1P28482 360 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 VIPR1P32241 457 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 ERFP50548 548 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 MAZP56270 477 aaKnown RBP10.7□□□□□ -0.7
SHMT2-216ENST00000554975 DCDC1P59894 354 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 EMX2Q04743 252 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 NFATC4Q14934 902 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 PDK3Q15120 406 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 NR6A1Q15406 480 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 C14orf28Q4W4Y0 310 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 SBSNQ6UWP8 590 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms