RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SLITRK5O94991 958 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 RAB36O95755 333 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 CLIC3O95833 236 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 ELK4P28324 431 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 NDUFS1P28331 727 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 GGT5P36269 586 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 GRIA2P42262 883 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 AFF1P51825 1210 aaKnown RBP13.53□□□□□ -0.24
VTI1B-204ENST00000554659 CDH11P55287 796 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 PRKCDQ05655 676 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 SCGB2B2Q4G0G5 96 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 HMBOX1Q6NT76 420 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 ABHD13Q7L211 337 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 DBF4BQ8NFT6 615 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF431Q8TF32 576 aaPredicted RBP13.53□□□□□ -0.24
VTI1B-204ENST00000554659 PSKH2Q96QS6 385 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 YIPF4Q9BSR8 244 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 TMED9Q9BVK6 235 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 METTL8Q9H825 291 aaKnown RBP13.53□□□□□ -0.24
VTI1B-204ENST00000554659 BRD7Q9NPI1 651 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 PCDHGB6Q9Y5F9 930 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 COL1A1P02452 1464 aaPredicted RBP13.52□□□□□ -0.24
VTI1B-204ENST00000554659 LTN1O94822 1766 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 TLX3O43711 291 aaPredicted RBP13.52□□□□□ -0.24
VTI1B-204ENST00000554659 TLX2O43763 284 aaPredicted RBP13.52□□□□□ -0.24
VTI1B-204ENST00000554659 HK1P19367 917 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 KCNQ1P51787 676 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 DIO3P55073 304 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 KLHL26Q53HC5 615 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 ARSIQ5FYB1 569 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 OR56A1Q8NGH5 318 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 SMPDL3AQ92484 453 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 C1orf74Q96LT6 269 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 NUDT15Q9NV35 164 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 LYARQ9NX58 379 aaKnown RBP13.52□□□□□ -0.24
VTI1B-204ENST00000554659 STOMP27105 288 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 KCNAB2Q13303 367 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 GRK1Q15835 563 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 STEAP4Q687X5 459 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 SLC36A4Q6YBV0 504 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF367Q7RTV3 350 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 XYLT2Q9H1B5 865 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 WDR26Q9H7D7 661 aa13.52□□□□□ -0.24
VTI1B-204ENST00000554659 LOC100509620A0A075B734 347 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 HCRTO43612 131 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 SNAPC5O75971 98 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 SNAP29O95721 258 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 OAS1P00973 400 aaKnown RBP13.52□□□□□ -0.25
VTI1B-204ENST00000554659 EDNRAP25101 427 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 MAP3K8P41279 467 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 DSG2Q14126 1118 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 MYLK3Q32MK0 819 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 ANKDD1AQ495B1 522 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 ANKRD26P1Q6NSI1 321 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 AGTRAPQ6RW13 159 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 ASRGL1Q7L266 308 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 PAQR7Q86WK9 346 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 CHCHD4Q8N4Q1 142 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 GALNT6Q8NCL4 622 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 THAP6Q8TBB0 222 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 TRMT61BQ9BVS5 477 aaKnown RBP13.52□□□□□ -0.25
VTI1B-204ENST00000554659 UTS2RQ9UKP6 389 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 EXOSC1Q9Y3B2 195 aaKnown RBP13.52□□□□□ -0.25
VTI1B-204ENST00000554659 A0A096LPI6 279 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 A0A0G2JN53 185 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 PIRO00625 290 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 ERI3O43414 337 aaKnown RBP13.52□□□□□ -0.25
VTI1B-204ENST00000554659 MTX2O75431 263 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 CD1DP15813 335 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 ATP5A1P25705 553 aaKnown RBP13.52□□□□□ -0.25
VTI1B-204ENST00000554659 BDKRB1P46663 353 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 TAS2R43P59537 309 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 MEDAGQ5VYS4 303 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 ANKFN1Q8N957 763 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 HERVK_113Q902F9 699 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 TMEM175Q9BSA9 504 aa13.52□□□□□ -0.25
VTI1B-204ENST00000554659 NARSO43776 548 aaKnown RBP13.51□□□□□ -0.25
VTI1B-204ENST00000554659 KAT7O95251 611 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 F8A1P23610 371 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 OR12D2P58182 307 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 C6orf141Q5SZD1 244 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 TAS1R3Q7RTX0 852 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 ZNF598Q86UK7 904 aaKnown RBP13.51□□□□□ -0.25
VTI1B-204ENST00000554659 TMEM17Q86X19 198 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 MINDY1Q8N5J2 469 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 OR5J2Q8NH18 312 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 TXLNGYQ9BZA5 131 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 PRMT3O60678 531 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 IGFBP4P22692 258 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 VAMP1P23763 118 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 GRIK2Q13002 908 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 SIX1Q15475 284 aaPredicted RBP13.51□□□□□ -0.25
VTI1B-204ENST00000554659 C10orf62Q5T681 223 aaPredicted RBP13.51□□□□□ -0.25
VTI1B-204ENST00000554659 FAM43BQ6ZT52 329 aaPredicted RBP13.51□□□□□ -0.25
VTI1B-204ENST00000554659 GALNT7Q86SF2 657 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 CLDN19Q8N6F1 224 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 SLAIN1Q8ND83 568 aa13.51□□□□□ -0.25
VTI1B-204ENST00000554659 ZNF471Q9BX82 626 aaPredicted RBP13.51□□□□□ -0.25
VTI1B-204ENST00000554659 EEDO75530 441 aaKnown RBP13.51□□□□□ -0.25
VTI1B-204ENST00000554659 TAS2R50P59544 299 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms