RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 GRHL2Q6ISB3 625 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 ZCCHC8Q6NZY4 707 aaKnown RBP5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 FAM151BQ6UXP7 276 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 Q6ZNB5 142 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 TPRG1Q6ZUI0 275 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 USP45Q70EL2 814 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 AHSA2Q719I0 299 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 GALNT5Q7Z7M9 940 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 CCDC190Q86UF4 302 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 RTN4RL1Q86UN2 441 aaPredicted RBP5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 FAM124AQ86V42 546 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 SLC22A16Q86VW1 577 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 KRT73Q86Y46 540 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 SYT12Q8IV01 421 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 PHACTR4Q8IZ21 702 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 CPXM2Q8N436 756 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 ATG16L2Q8NAA4 619 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 SLC43A3Q8NBI5 491 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 VPS37AQ8NEZ2 397 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 FLCNQ8NFG4 579 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 OR4C15Q8NGM1 316 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 PSMA8Q8TAA3 256 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 WDR20Q8TBZ3 569 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 TP53INP1Q96A56 240 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 COQ8BQ96D53 544 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 TMCO6Q96DC7 493 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 MTERF3Q96E29 417 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 TSSK3Q96PN8 268 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 SNX18Q96RF0 628 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 COPS8Q99627 209 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 MAPKAP1Q9BPZ7 522 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 CLSTN3Q9BQT9 956 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 INPP5KQ9BT40 448 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 TTPALQ9BTX7 342 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 DOHHQ9BU89 302 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 TRAF4Q9BUZ4 470 aaPredicted RBP5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 CDADC1Q9BWV3 514 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 APOL5Q9BWW9 433 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 GPR62Q9BZJ7 368 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 BHLHE41Q9C0J9 482 aaPredicted RBP5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 OR2B2Q9GZK3 357 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 REXO4Q9GZR2 422 aaKnown RBP5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 RAD18Q9NS91 495 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 ARL15Q9NXU5 204 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 GPRC5BQ9NZH0 403 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 TRPM5Q9NZQ8 1165 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 CRNNQ9UBG3 495 aaPredicted RBP5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 SPASTQ9UBP0 616 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 ZNF282Q9UDV7 671 aaPredicted RBP5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 AFF4Q9UHB7 1163 aaKnown RBP5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 ATP6V1HQ9UI12 483 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 ZMYM5Q9UJ78 669 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 ATP11BQ9Y2G3 1177 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 PRG3Q9Y2Y8 225 aaPredicted RBP5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 TSC22D4Q9Y3Q8 395 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 PCDHGA2Q9Y5H1 932 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 LYVE1Q9Y5Y7 322 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 ACTL7AQ9Y615 435 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 MRPL42Q9Y6G3 142 aaKnown RBP5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 U3KQV3 271 aa5.07□□□□□ -1.6
TMEM55B-204ENST00000553602 MICAL3Q7RTP6 2002 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 DSPPQ9NZW4 1301 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 FAM172BPA6NC97 362 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 MYO1GB0I1T2 1018 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 FAM47E-STBD1D6RA91 191 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 M0R082 166 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 TOR1BO14657 336 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 SCAMP3O14828 347 aaKnown RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 DSCR3O14972 297 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 SEC14L5O43304 696 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 SMAD6O43541 496 aaKnown RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 TNFRSF21O75509 655 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 MYO1DO94832 1006 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 SLCO2B1O94956 709 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 PRAMEF12O95522 483 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 LGI1O95970 557 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 RECKO95980 971 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 IFNA14P01570 189 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 APOA1P02647 267 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 LCKP06239 509 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 HIST1H2AGP0C0S8 130 aaPredicted RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 ZNF30P17039 623 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 DDX5P17844 614 aaKnown RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 HIST1H2ADP20671 130 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 GADD45AP24522 165 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 LIPAP38571 399 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 CASP3P42574 277 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 GDF5P43026 501 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 CTSOP43234 321 aaPredicted RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 SLC15A1P46059 708 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 RPS5P46782 204 aaKnown RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 LIMS1P48059 325 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 SLC11A1P49279 550 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 RGS6P49758 472 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 CRYBA2P53672 197 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 TPTEP56180 551 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 SELENOWP63302 87 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 RHAGQ02094 409 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 DUSP4Q13115 394 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 PPIGQ13427 754 aaKnown RBP eCLIP5.06□□□□□ -1.67e-10■■■□□ 15.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms