RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 FKBP1BP68106 108 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 TEFQ10587 303 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 CCDC6Q16204 474 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 CDC37Q16543 378 aaPredicted RBP4.53□□□□□ -1.68
SYNE2-210ENST00000553455 KCTD11Q693B1 232 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 USP43Q70EL4 1123 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 ASPGQ86U10 573 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 NIPA2Q8N8Q9 360 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 GPATCH11Q8N954 259 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 SMYD1Q8NB12 490 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 OR10G8Q8NGN5 311 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 ZNRF4Q8WWF5 429 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 AZIN2Q96A70 460 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 NXPE2Q96DL1 559 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 NECTIN4Q96NY8 510 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 NEDD4LQ96PU5 975 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 FSD1Q9BTV5 496 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 PITPNM3Q9BZ71 974 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 SLC12A6Q9UHW9 1150 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 KNSTRNQ9Y448 316 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 COLEC10Q9Y6Z7 277 aa4.53□□□□□ -1.68
SYNE2-210ENST00000553455 KIAA1217Q5T5P2 1943 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 A0A087WW49 117 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 FAM149AA5PLN7 773 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 ZNF195O14628 629 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 MLNRO43193 412 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 KERAO60938 352 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 SAP30O75446 220 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 SP1P08047 785 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 SBK2P0C263 348 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 RPL35AP18077 110 aaKnown RBP4.52□□□□□ -1.69
SYNE2-210ENST00000553455 ELAVL4P26378 380 aaKnown RBP4.52□□□□□ -1.69
SYNE2-210ENST00000553455 OR3A2P47893 321 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 UCP2P55851 309 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 YBEYP58557 167 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-210ENST00000553455 DCDC1P59894 354 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 ABRQ12979 859 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 NPRL3Q12980 569 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 TMEM132DQ14C87 1099 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 PTPN14Q15678 1187 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 ZNF876PQ49A33 203 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 ARMCX4Q5H9R4 360 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 C9orf50Q5SZB4 431 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 ALKBH5Q6P6C2 394 aaKnown RBP4.52□□□□□ -1.69
SYNE2-210ENST00000553455 PRSS42Q7Z5A4 293 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 KLHDC8BQ8IXV7 354 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 FAM76AQ8TAV0 307 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 ST7LQ8TDW4 575 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 RFT1Q96AA3 541 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 LGALS12Q96DT0 336 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 C5orf30Q96GV9 206 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 IDI2Q9BXS1 227 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 RPF1Q9H9Y2 349 aaKnown RBP4.52□□□□□ -1.69
SYNE2-210ENST00000553455 EXOC1Q9NV70 894 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 WWOXQ9NZC7 414 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 TMEM181Q9P2C4 612 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 ITM2BQ9Y287 266 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 TMED7Q9Y3B3 224 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 PYGO1Q9Y3Y4 419 aa4.52□□□□□ -1.69
SYNE2-210ENST00000553455 A0A1W2PR80 420 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 MAGEB16A2A368 324 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 A8MVM7 634 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 VEGFDO43915 354 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 CYTIPO60759 359 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 MT-ND2P03891 347 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 MT-ND3P03897 115 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 HMBSP08397 361 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 HLA-DPA1P20036 260 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 PPA1Q15181 289 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 ACKR1Q16570 336 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 IFI44LQ53G44 452 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 LAX1Q8IWV1 398 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 SMAP2Q8WU79 429 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-210ENST00000553455 FAM46BQ96A09 425 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 C2orf48Q96LS8 159 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 FAM218AQ96MZ4 157 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 FUCA2Q9BTY2 467 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 TDRD1Q9BXT4 1180 aaKnown RBP4.51□□□□□ -1.69
SYNE2-210ENST00000553455 TRIM7Q9C029 511 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 AKIRIN1Q9H9L7 192 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-210ENST00000553455 CYP39A1Q9NYL5 469 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 MIS18AQ9NYP9 233 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 HACD3Q9P035 362 aa4.51□□□□□ -1.69
SYNE2-210ENST00000553455 SPATA31D1Q6ZQQ2 1576 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 A0A087X002 238 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 HHLA1C9JL84 531 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 LETM1O95202 739 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-210ENST00000553455 CFC1BP0CG36 223 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 CFC1P0CG37 223 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 CEBPBP17676 345 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 SOX3P41225 446 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 GUCY2DQ02846 1103 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 SLC34A1Q06495 639 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 SGCGQ13326 291 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 EFTUD2Q15029 972 aaKnown RBP eCLIP4.5□□□□□ -1.69
SYNE2-210ENST00000553455 STXBP2Q15833 593 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 DUSP5Q16690 384 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 Q6ZSR9 355 aa4.5□□□□□ -1.69
SYNE2-210ENST00000553455 PTAR1Q7Z6K3 402 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms