RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 TTPAP49638 278 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 PRIM2P49643 509 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 SRP54P61011 504 aaKnown RBP11.69□□□□□ -0.54
VDR-208ENST00000550325 DBPQ10586 325 aaPredicted RBP11.69□□□□□ -0.54
VDR-208ENST00000550325 FGFBP1Q14512 234 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 ZMYND11Q15326 602 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 UGT8Q16880 541 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 RAB41Q5JT25 222 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 DDI2Q5TDH0 399 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 PAQR6Q6TCH4 344 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 SPATA2LQ8IUW3 424 aaPredicted RBP11.69□□□□□ -0.54
VDR-208ENST00000550325 BBS7Q8IWZ6 715 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 Q8N402 240 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 ESX1Q8N693 406 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 C3orf58Q8NDZ4 430 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 ZNF431Q8TF32 576 aaPredicted RBP11.69□□□□□ -0.54
VDR-208ENST00000550325 SIPA1Q96FS4 1042 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 DPCDQ9BVM2 203 aaPredicted RBP11.69□□□□□ -0.54
VDR-208ENST00000550325 ELP3Q9H9T3 547 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 MAPRE3Q9UPY8 281 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 LOC285095A0A1B0GVY8 99 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 LRRTM2O43300 516 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 POMCP01189 267 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 MYL12AP19105 171 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 SSTR2P30874 369 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 ITGA1P56199 1179 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 SLC35F1Q5T1Q4 408 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 SLC51BQ86UW2 128 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 MDGA1Q8NFP4 955 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 OR7D4Q8NG98 312 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 GPR150Q8NGU9 434 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 RIT1Q92963 219 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 CINPQ9BW66 212 aaPredicted RBP11.69□□□□□ -0.54
VDR-208ENST00000550325 CDCP1Q9H5V8 836 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 C3orf14Q9HBI5 128 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 DIABLOQ9NR28 239 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 ELOVL2Q9NXB9 296 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 PPT2Q9UMR5 302 aa11.69□□□□□ -0.54
VDR-208ENST00000550325 CFAP20Q9Y6A4 193 aaKnown RBP11.69□□□□□ -0.54
VDR-208ENST00000550325 COL11A2P13942 1736 aaPredicted RBP11.69□□□□□ -0.54
VDR-208ENST00000550325 FAM227AF5H4B4 570 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 PTGESO14684 152 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 ACPPP15309 386 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 M6PRP20645 277 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 PTPN5P54829 565 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 RPA4Q13156 261 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 LARS2Q15031 903 aaKnown RBP11.68□□□□□ -0.54
VDR-208ENST00000550325 SLC39A12Q504Y0 691 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 RNASE12Q5GAN4 147 aaKnown RBP11.68□□□□□ -0.54
VDR-208ENST00000550325 FAM151BQ6UXP7 276 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 TMIGD1Q6UXZ0 262 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 KLHDC8BQ8IXV7 354 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 AKAP1Q92667 903 aaKnown RBP eCLIP11.68□□□□□ -0.54
VDR-208ENST00000550325 ZBED3Q96IU2 234 aaPredicted RBP11.68□□□□□ -0.54
VDR-208ENST00000550325 MAGEB10Q96LZ2 347 aaPredicted RBP11.68□□□□□ -0.54
VDR-208ENST00000550325 C16orf70Q9BSU1 422 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 FAM126AQ9BYI3 521 aaPredicted RBP11.68□□□□□ -0.54
VDR-208ENST00000550325 SERHLQ9NQF3 203 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 ASAH2Q9NR71 780 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 TMCC3Q9ULS5 477 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 FZD4Q9ULV1 537 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 PTCH2Q9Y6C5 1203 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 A0A0D9SEW6 157 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 PRAMEF33A0A0G2JMD5 474 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 PRAMEF10O60809 474 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 KCNK5O95279 499 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 ADRA2AP08913 450 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 CTPS1P17812 591 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 CNR2P34972 360 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 AP2S1P53680 142 aaPredicted RBP11.68□□□□□ -0.54
VDR-208ENST00000550325 TAGLNQ01995 201 aaKnown RBP11.68□□□□□ -0.54
VDR-208ENST00000550325 VGLL4Q14135 290 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 SUZ12Q15022 739 aaKnown RBP11.68□□□□□ -0.54
VDR-208ENST00000550325 TIGD5Q53EQ6 642 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 COMMD7Q86VX2 200 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 CALHM3Q86XJ0 350 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 SH3KBP1Q96B97 665 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 PITX2Q99697 317 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 ACPTQ9BZG2 426 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 TMEM161AQ9NX61 479 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 SH3BP4Q9P0V3 963 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 BRWD3Q6RI45 1802 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 CENPFP49454 3210 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 FABP7O15540 132 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 LPOP22079 712 aaPredicted RBP11.68□□□□□ -0.54
VDR-208ENST00000550325 RGS4P49798 205 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.68□□□□□ -0.54
VDR-208ENST00000550325 SPHARQ15513 63 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 LEXMQ3ZCV2 418 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 FBXL22Q6P050 247 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 FAHD1Q6P587 224 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 USP30Q70CQ3 517 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 ZNF598Q86UK7 904 aaKnown RBP11.68□□□□□ -0.54
VDR-208ENST00000550325 ZFP41Q8N8Y5 198 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 OR6J1Q8NGC5 347 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 APIPQ96GX9 242 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 FAM129BQ96TA1 746 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 GPR63Q9BZJ6 419 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 MGAT4AQ9UM21 535 aa11.68□□□□□ -0.54
VDR-208ENST00000550325 YARS2Q9Y2Z4 477 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms