RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 DLX5P56178 289 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 OR4D2P58180 307 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 MLF1P58340 268 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 ABATP80404 500 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 TAP2Q03519 686 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 Q71RC1 249 aaPredicted RBP11.94□□□□□ -0.5
SCAF11-208ENST00000546534 LRRC6Q86X45 466 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 PDSS2Q86YH6 399 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 C16orf52Q8NHV5 167 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 ZNF480Q8WV37 535 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 PEX13Q92968 403 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 FAM136AQ96C01 138 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 CCDC138Q96M89 665 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 PRAP1Q96NZ9 151 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 BIRC8Q96P09 236 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 CHRAC1Q9NRG0 131 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 LANCL2Q9NS86 450 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 PLEKHA6Q9Y2H5 1048 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 KLF13Q9Y2Y9 288 aaPredicted RBP11.94□□□□□ -0.5
SCAF11-208ENST00000546534 L3MBTL1Q9Y468 752 aa11.94□□□□□ -0.5
SCAF11-208ENST00000546534 SYCE3A1L190 88 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 MAGEB17A8MXT2 336 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 PROM1O43490 865 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 PEX1O43933 1283 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 NIPSNAP2O75323 286 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 TPM1P09493 284 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 ATP5DP30049 168 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 HSD17B2P37059 387 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 ADAM8P78325 824 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 ACSBG2Q5FVE4 666 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 TMEM214Q6NUQ4 689 aaKnown RBP11.93□□□□□ -0.5
SCAF11-208ENST00000546534 ACAD11Q709F0 780 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 OR52N2Q8NGI0 321 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 SLC35B2Q8TB61 432 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 PEX11GQ96HA9 241 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 ALPK1Q96QP1 1244 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 EBNA1BP2Q99848 306 aaKnown RBP11.93□□□□□ -0.5
SCAF11-208ENST00000546534 SMR3AQ99954 134 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 ETNK1Q9HBU6 452 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 ANKHQ9HCJ1 492 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 FAM114A2Q9NRY5 505 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 GALPQ9UBC7 116 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 HEATR5BQ9P2D3 2071 aa11.93□□□□□ -0.5
SCAF11-208ENST00000546534 FLNAP21333 2647 aaKnown RBP11.92□□□□□ -0.5
SCAF11-208ENST00000546534 KCNE1BA0A087WTH5 132 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 ZNF839A8K0R7 811 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 KLRC4-KLRK1H3BQV0 150 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 CATP04040 527 aaKnown RBP11.92□□□□□ -0.5
SCAF11-208ENST00000546534 DNASE1P24855 282 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 FMO4P31512 558 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 KCNJ11Q14654 390 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 KLHL38Q2WGJ6 581 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 THEMIS2Q5TEJ8 643 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 ARHGAP11AQ6P4F7 1023 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 VSTM4Q8IW00 320 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 LRRC56Q8IYG6 542 aaPredicted RBP11.92□□□□□ -0.5
SCAF11-208ENST00000546534 ZZZ3Q8IYH5 903 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 MPP5Q8N3R9 675 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 ZFP62Q8NB50 900 aaPredicted RBP11.92□□□□□ -0.5
SCAF11-208ENST00000546534 KCT2Q8NC54 265 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 PPHLN1Q8NEY8 458 aaKnown RBP11.92□□□□□ -0.5
SCAF11-208ENST00000546534 OR5M3Q8NGP4 307 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 OR10Q1Q8NGQ4 319 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 ZCCHC10Q8TBK6 192 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 RMND5BQ96G75 393 aaPredicted RBP11.92□□□□□ -0.5
SCAF11-208ENST00000546534 PWWP2AQ96N64 755 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 GPATCH1Q9BRR8 931 aaKnown RBP11.92□□□□□ -0.5
SCAF11-208ENST00000546534 DEFB127Q9H1M4 99 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 CLEC4MQ9H2X3 399 aaPredicted RBP11.92□□□□□ -0.5
SCAF11-208ENST00000546534 NAALAD2Q9Y3Q0 740 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 PCDHA13Q9Y5I0 950 aa11.92□□□□□ -0.5
SCAF11-208ENST00000546534 GOLGA6L9A6NEM1 432 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 ZNF860A6NHJ4 632 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 KIF5CO60282 957 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 PTMAP06454 111 aaKnown RBP11.91□□□□□ -0.5
SCAF11-208ENST00000546534 FBXO45P0C2W1 286 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 CHRM3P20309 590 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 DGKQP52824 942 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 GPR85P60893 370 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 RPS15AP62244 130 aaKnown RBP11.91□□□□□ -0.5
SCAF11-208ENST00000546534 MPP1Q00013 466 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 SNTB1Q13884 538 aaKnown RBP11.91□□□□□ -0.5
SCAF11-208ENST00000546534 GXYLT1Q4G148 440 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 PCID2Q5JVF3 399 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 MEI1Q5TIA1 1274 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 MDGA2Q7Z553 956 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 BIVMQ86UB2 503 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 CYP4X1Q8N118 509 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 MYRIPQ8NFW9 859 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 OR5T3Q8NGG3 340 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 OR5M9Q8NGP3 310 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 TM4SF19Q96DZ7 209 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 OR1F2PQ96R84 312 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 OCSTAMPQ9BR26 566 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 RASSF1Q9NS23 344 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 PNPLA3Q9NST1 481 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 TREX1Q9NSU2 369 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 TMEM184CQ9NVA4 438 aa11.91□□□□□ -0.5
SCAF11-208ENST00000546534 TCRBV7S2A1N4TA0A589 114 aa11.9□□□□□ -0.5
SCAF11-208ENST00000546534 FEZF1A0PJY2 475 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms