RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 C14orf105Q9NVL8 296 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 IL17BQ9UHF5 180 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 TCFL5Q9UL49 500 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 POLHQ9Y253 713 aa16.64■□□□□ 0.25
CD9-211ENST00000546073 SPEGQ15772 3267 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 A0A0A6YYC8 382 aaPredicted RBP16.63■□□□□ 0.25
CD9-211ENST00000546073 A8MT66 165 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 H3BQF6 201 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 I3L1I5 382 aaPredicted RBP16.63■□□□□ 0.25
CD9-211ENST00000546073 CRCPO75575 148 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 STATHP02808 62 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 CTSBP07858 339 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 CPA3P15088 417 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 ALOX12P18054 663 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 IMPDH1P20839 514 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 NFKB2Q00653 900 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 IFT88Q13099 833 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 SSPNQ14714 243 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 TOR1AIP1Q5JTV8 583 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 TMEM214Q6NUQ4 689 aaKnown RBP16.63■□□□□ 0.25
CD9-211ENST00000546073 ZNF517Q6ZMY9 492 aaPredicted RBP16.63■□□□□ 0.25
CD9-211ENST00000546073 VN1R4Q7Z5H5 301 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 CCNYL1Q8N7R7 359 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 ZNF740Q8NDX6 193 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 MZB1Q8WU39 189 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 WDR34Q96EX3 536 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 APOPT1Q96IL0 206 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 NMRK1Q9NWW6 199 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 LHX6Q9UPM6 363 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 MAP4K5Q9Y4K4 846 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 SPACA6W5XKT8 324 aa16.63■□□□□ 0.25
CD9-211ENST00000546073 CHD8Q9HCK8 2581 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 E2F3O00716 465 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 SIX3O95343 332 aaPredicted RBP16.62■□□□□ 0.25
CD9-211ENST00000546073 HEXBP07686 556 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 NEFHP12036 1026 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 IL10P22301 178 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 CCR10P46092 362 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 RAP1GDS1P52306 607 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 RRADP55042 308 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 SLC18A2Q05940 514 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 CDC20Q12834 499 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 DDX39BQ13838 428 aaKnown RBP16.62■□□□□ 0.25
CD9-211ENST00000546073 UGT8Q16880 541 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 TMEM35AQ53FP2 167 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 TRABD2AQ86V40 505 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.62■□□□□ 0.25
CD9-211ENST00000546073 KCT2Q8NC54 265 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 METTL21AQ8WXB1 218 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 NACC2Q96BF6 587 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 CMTM7Q96FZ5 175 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 REXO4Q9GZR2 422 aaKnown RBP16.62■□□□□ 0.25
CD9-211ENST00000546073 ELOVL6Q9H5J4 265 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 SEMA4BQ9NPR2 832 aaPredicted RBP16.62■□□□□ 0.25
CD9-211ENST00000546073 SNX6Q9UNH7 406 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 SSUH2Q9Y2M2 353 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 ACACAQ13085 2346 aa16.62■□□□□ 0.25
CD9-211ENST00000546073 TPRP12270 2363 aaKnown RBP16.62■□□□□ 0.25
CD9-211ENST00000546073 AKAP13Q12802 2813 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 PCDH17O14917 1159 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 NKX2-8O15522 239 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 P2RX6O15547 441 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 CTIFO43310 598 aaKnown RBP16.61■□□□□ 0.25
CD9-211ENST00000546073 ONECUT2O95948 504 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 ITGB2P05107 769 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 IL1RNP18510 177 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 JAK1P23458 1154 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 OTX2P32243 289 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 PRKAA2P54646 552 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 PCDH1Q08174 1060 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 ZNF844Q08AG5 666 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 CPSF6Q16630 551 aaKnown RBP eCLIP16.61■□□□□ 0.25
CD9-211ENST00000546073 DEFB134Q4QY38 66 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 IRAK1BP1Q5VVH5 260 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 ZNF385CQ66K41 422 aaPredicted RBP16.61■□□□□ 0.25
CD9-211ENST00000546073 BORAQ6PGQ7 559 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 FAM198BQ6UWH4 519 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 ZYG11AQ6WRX3 759 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 OR9A4Q8NGU2 314 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 OR2Y1Q8NGV0 311 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 PPP1R14CQ8TAE6 165 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 GAL3ST3Q96A11 431 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 C10orf90Q96M02 699 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 FER1L6-AS2Q96M78 137 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 ZIM3Q96PE6 472 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 MACROD1Q9BQ69 325 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 CRB3Q9BUF7 120 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 NTMT1Q9BV86 223 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 SLC26A1Q9H2B4 701 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 RHBGQ9H310 441 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 PRORYQ9H606 182 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 AKIRIN1Q9H9L7 192 aaPredicted RBP16.61■□□□□ 0.25
CD9-211ENST00000546073 SEMA3GQ9NS98 782 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 AHSPQ9NZD4 102 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 COPG2Q9UBF2 871 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 PCTPQ9UKL6 214 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 MAN2B2Q9Y2E5 1009 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 NAALAD2Q9Y3Q0 740 aa16.61■□□□□ 0.25
CD9-211ENST00000546073 MRPS18BQ9Y676 258 aaKnown RBP16.61■□□□□ 0.25
CD9-211ENST00000546073 EIF4E1BA6NMX2 242 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms