RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TRAM1Q15629 374 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 GALNT7Q86SF2 657 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 IQCHQ86VS3 1027 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 C7orf57Q8NEG2 295 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 OR52E4Q8NGH9 312 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 CYB5D2Q8WUJ1 264 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 ISOC1Q96CN7 298 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 SLC7A6OSQ96CW6 309 aaPredicted RBP12.12□□□□□ -0.47
COL4A6-209ENST00000545689 IGSF21Q96ID5 467 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 TTYH1Q9H313 450 aaPredicted RBP12.12□□□□□ -0.47
COL4A6-209ENST00000545689 IFT52Q9Y366 437 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 RBM7Q9Y580 266 aaKnown RBP12.12□□□□□ -0.47
COL4A6-209ENST00000545689 PLOD2O00469 737 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 MTX2O75431 263 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 DHRS4L1P0CG22 281 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 PSKH1P11801 424 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 MASP1P48740 699 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 BTN3A2P78410 334 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 SEMG2Q02383 582 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 TLE2Q04725 743 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 RASGEF1BQ0VAM2 473 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 ENPP2Q13822 863 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 SYT16Q17RD7 645 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 PM20D1Q6GTS8 502 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 LCN8Q6JVE9 175 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 RASSF6Q6ZTQ3 369 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 CEP68Q76N32 757 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 BTN2A1Q7KYR7 527 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 MCEMP1Q8IX19 187 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 FBRSL1Q9HCM7 1045 aaKnown RBP12.12□□□□□ -0.47
COL4A6-209ENST00000545689 MAP10Q9P2G4 905 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 TMA7Q9Y2S6 64 aaKnown RBP12.12□□□□□ -0.47
COL4A6-209ENST00000545689 A0A0D9SEW6 157 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 JUPP14923 745 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 BMP8BP34820 402 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 PPP1R3AQ16821 1122 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 WSCD2Q2TBF2 565 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 BMP8AQ7Z5Y6 402 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 CMTM8Q8IZV2 173 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 SCML4Q8N228 414 aa12.12□□□□□ -0.47
COL4A6-209ENST00000545689 GAS2L1Q99501 681 aaPredicted RBP12.12□□□□□ -0.47
COL4A6-209ENST00000545689 SOX4Q06945 474 aaPredicted RBP12.11□□□□□ -0.47
COL4A6-209ENST00000545689 GPM6BQ13491 265 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 ZNF805Q5CZA5 627 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 SLC8B1Q6J4K2 584 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 NRSN1Q8IZ57 195 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 CLDN19Q8N6F1 224 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 Q9N2J8 555 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 GPRC5BQ9NZH0 403 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 MED11Q9P086 117 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 SLC19A2O60779 497 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 CPNE3O75131 537 aaKnown RBP12.11□□□□□ -0.47
COL4A6-209ENST00000545689 SOX30O94993 753 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 MAPK3P27361 379 aaPredicted RBP12.11□□□□□ -0.47
COL4A6-209ENST00000545689 AGTR2P50052 363 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 TICAM1Q8IUC6 712 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 GID4Q8IVV7 300 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 CEP97Q8IW35 865 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 FAM110BQ8TC76 370 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 IL4I1Q96RQ9 567 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 SLC30A2Q9BRI3 323 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 BHLHE41Q9C0J9 482 aaPredicted RBP12.11□□□□□ -0.47
COL4A6-209ENST00000545689 SERINC1Q9NRX5 453 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 ABI3Q9P2A4 366 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 BACE2Q9Y5Z0 518 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 GRXCR2A6NFK2 248 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 MAT2AP31153 395 aaKnown RBP12.11□□□□□ -0.47
COL4A6-209ENST00000545689 HNF1BP35680 557 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 VMACQ2NL98 169 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 PLCZ1Q86YW0 608 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 KAT2AQ92830 837 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 CD180Q99467 661 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 DOHHQ9BU89 302 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 CST11Q9H112 138 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 DPAGT1Q9H3H5 408 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 TEX46H3BTG2 121 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 GALTP07902 379 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 YES1P07947 543 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 ITIH1P19827 911 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 SLC6A6P31641 620 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 NRIP1P48552 1158 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 DIO3P55073 304 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 CDH11P55287 796 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 ADAM8P78325 824 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 TLR1Q15399 786 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 EOGTQ5NDL2 527 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 SETD7Q8WTS6 366 aaKnown RBP12.11□□□□□ -0.47
COL4A6-209ENST00000545689 TLR9Q9NR96 1032 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 NOS1APO75052 506 aaPredicted RBP12.11□□□□□ -0.47
COL4A6-209ENST00000545689 BEST1O76090 585 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 ITGB1P05556 798 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 CXCR1P25024 350 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 TIA1P31483 386 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL4A6-209ENST00000545689 DCDC1P59894 354 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 TMEM115Q12893 351 aaPredicted RBP12.11□□□□□ -0.47
COL4A6-209ENST00000545689 ZNF423Q2M1K9 1284 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 RPL13AP3Q6NVV1 102 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 METTL2BQ6P1Q9 378 aaKnown RBP12.11□□□□□ -0.47
COL4A6-209ENST00000545689 RNF130Q86XS8 419 aa12.11□□□□□ -0.47
COL4A6-209ENST00000545689 SCGB3A2Q96PL1 93 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms