RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 NR1H2P55055 460 aa14.32□□□□□ -0.12
CLSTN3-216ENST00000545663 DMTNQ08495 405 aa14.32□□□□□ -0.12
CLSTN3-216ENST00000545663 FAM53BQ14153 422 aa14.32□□□□□ -0.12
CLSTN3-216ENST00000545663 HSPB2Q16082 182 aa14.32□□□□□ -0.12
CLSTN3-216ENST00000545663 PPP1R14CQ8TAE6 165 aa14.32□□□□□ -0.12
CLSTN3-216ENST00000545663 LRRC46Q96FV0 321 aa14.32□□□□□ -0.12
CLSTN3-216ENST00000545663 PDLIM2Q96JY6 352 aa14.32□□□□□ -0.12
CLSTN3-216ENST00000545663 TTTY12Q9BZ98 90 aa14.32□□□□□ -0.12
CLSTN3-216ENST00000545663 DRG1Q9Y295 367 aaKnown RBP14.32□□□□□ -0.12
CLSTN3-216ENST00000545663 NFS1Q9Y697 457 aa14.32□□□□□ -0.12
CLSTN3-216ENST00000545663 EPN1Q9Y6I3 576 aaPredicted RBP14.32□□□□□ -0.12
CLSTN3-216ENST00000545663 A0A087X1B8 175 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 IQCF5A8MTL0 148 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 H0YIG0 161 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 QSOX1O00391 747 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 GPC4O75487 556 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 SIX3O95343 332 aaPredicted RBP14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 IL1RNP18510 177 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 CMPK1P30085 196 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 MAGEA5P43359 124 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 AGFG1P52594 562 aaKnown RBP14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 SRSF2Q01130 221 aaKnown RBP14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 CAPRIN1Q14444 709 aaKnown RBP14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 DENND5AQ6IQ26 1287 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 CYP4X1Q8N118 509 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 TMEM251Q8N6I4 163 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 OR2M7Q8NG81 312 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 RERGQ96A58 199 aaPredicted RBP14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 RNF25Q96BH1 459 aaPredicted RBP14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 C19orf24Q9BVV8 132 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 C10orf88Q9H8K7 445 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 LANCL2Q9NS86 450 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 UVRAGQ9P2Y5 699 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 SPRR3Q9UBC9 169 aa14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 MTRF1LQ9UGC7 380 aaKnown RBP14.31□□□□□ -0.12
CLSTN3-216ENST00000545663 ATP6AP2A0A1C7CYW4 349 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 FAM47E-STBD1D6RA91 191 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 AQP7O14520 342 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 FCHO1O14526 889 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 ATP6AP2O75787 350 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 GLSO94925 669 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 TUBB4AP04350 444 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 OR56A5P0C7T3 313 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 TMEM253P0C7T8 217 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 SPARCL1Q14515 664 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 CCDC38Q502W7 563 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 WLSQ5T9L3 541 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 SUSD1Q6UWL2 747 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 PACS1Q6VY07 963 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 KIF18BQ86Y91 864 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 LRRC8AQ8IWT6 810 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 RHOT2Q8IXI1 618 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 TMEM156Q8N614 296 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 PLPP5Q8NEB5 264 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 HMGCLL1Q8TB92 370 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 CDKN2AIPNLQ96HQ2 116 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 CCL19Q99731 98 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 EPB41L4BQ9H329 900 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 MRPS30Q9NP92 439 aaKnown RBP14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 PCYOX1Q9UHG3 505 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 FOXD3Q9UJU5 478 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 TTC7AQ9ULT0 858 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 NENFQ9UMX5 172 aa14.3□□□□□ -0.12
CLSTN3-216ENST00000545663 KIAA1549Q9HCM3 1950 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 MAGEB17A8MXT2 336 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 ZNF487B1APH4 448 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 H7C0S8 307 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 CES2O00748 559 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 NSA2O95478 260 aaKnown RBP14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 C1orf105O95561 183 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 ZFXP17010 805 aaPredicted RBP14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 ENDOUP21128 410 aaKnown RBP14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 BCL6P41182 706 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 MAGEA1P43355 309 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 MAN2A2P49641 1150 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 GEMP55040 296 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 TNK1Q13470 666 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 SLC22A16Q86VW1 577 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 PDSS2Q86YH6 399 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 ARMC10Q8N2F6 343 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 PSD4Q8NDX1 1056 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 RAD51AP1Q96B01 352 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 PEX11GQ96HA9 241 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 RAB11FIP5Q9BXF6 653 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 DEFB126Q9BYW3 111 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 TIMMDC1Q9NPL8 285 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 YAE1D1Q9NRH1 226 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 NLE1Q9NVX2 485 aaPredicted RBP14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 R3HDM2Q9Y2K5 976 aaKnown RBP14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 SCN3AQ9NY46 2000 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 ABCA1O95477 2261 aa14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.29□□□□□ -0.12
CLSTN3-216ENST00000545663 ACOT7O00154 380 aa14.28□□□□□ -0.12
CLSTN3-216ENST00000545663 HAT1O14929 419 aa14.28□□□□□ -0.12
CLSTN3-216ENST00000545663 RDH16O75452 317 aa14.28□□□□□ -0.12
CLSTN3-216ENST00000545663 ITGA10O75578 1167 aa14.28□□□□□ -0.12
CLSTN3-216ENST00000545663 TPH1P17752 444 aa14.28□□□□□ -0.12
CLSTN3-216ENST00000545663 MPP1Q00013 466 aa14.28□□□□□ -0.12
CLSTN3-216ENST00000545663 ITIH4Q14624 930 aa14.28□□□□□ -0.12
CLSTN3-216ENST00000545663 NDUFA9Q16795 377 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms