RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SLC5A6Q9Y289 635 aa19.93■□□□□ 0.78
SCARB1-210ENST00000545493 DYTNA2CJ06 578 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 OR1F1O43749 312 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 CDC123O75794 336 aaPredicted RBP19.92■□□□□ 0.78
SCARB1-210ENST00000545493 WFS1O76024 890 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 WDPCPO95876 746 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 B3GALT4O96024 378 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 UQCRHP07919 91 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 EDN3P14138 238 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 PAFAH1B1P43034 410 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 SCTRP47872 440 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 RHAGQ02094 409 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 CBLBQ13191 982 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 FAM180AQ6UWF9 173 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 CAPN12Q6ZSI9 719 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 CEP97Q8IW35 865 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 ANKRD49Q8WVL7 239 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 HAS2Q92819 552 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 TSLPQ969D9 159 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 PEX11GQ96HA9 241 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 TAAR6Q96RI8 345 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 TRIM54Q9BYV2 358 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 CROCCQ5TZA2 2017 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 SCN2AQ99250 2005 aa19.92■□□□□ 0.78
SCARB1-210ENST00000545493 TRAV17A0A0B4J275 112 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 GALR3O60755 368 aaPredicted RBP19.91■□□□□ 0.78
SCARB1-210ENST00000545493 PIAS1O75925 651 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 WISP3O95389 354 aaPredicted RBP19.91■□□□□ 0.78
SCARB1-210ENST00000545493 CLDN1O95832 211 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 TDGF1P3P51864 188 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 AP2B1P63010 937 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 OLR1P78380 273 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 PWP1Q13610 501 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 HERC3Q15034 1050 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 INAQ16352 499 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 PLAG1Q6DJT9 500 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 TMPRSS11BQ86T26 416 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 NKAPQ8N5F7 415 aaKnown RBP19.91■□□□□ 0.78
SCARB1-210ENST00000545493 ANKRD53Q8N9V6 530 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 NT5CQ8TCD5 201 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 VPS39Q96JC1 886 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 C5orf34Q96MH7 638 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 OR1F2PQ96R84 312 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 RNF32Q9H0A6 362 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 RHOJQ9H4E5 214 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 PELI2Q9HAT8 420 aa19.91■□□□□ 0.78
SCARB1-210ENST00000545493 C4orf51C9J302 202 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 DNAJB6O75190 326 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 ZNF888P0CJ79 500 aaPredicted RBP19.9■□□□□ 0.78
SCARB1-210ENST00000545493 ICAM2P13598 275 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 ALOX12P18054 663 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 CDKL1Q00532 357 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 ZNF33BQ06732 778 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 CSHL1Q14406 222 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 TSNQ15631 228 aaKnown RBP19.9■□□□□ 0.78
SCARB1-210ENST00000545493 BTBD16Q32M84 506 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 DEFB134Q4QY38 66 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 ZNF324BQ6AW86 544 aaPredicted RBP19.9■□□□□ 0.78
SCARB1-210ENST00000545493 THOC6Q86W42 341 aaKnown RBP19.9■□□□□ 0.78
SCARB1-210ENST00000545493 BCORP1Q8N888 145 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 MAGEB10Q96LZ2 347 aaPredicted RBP19.9■□□□□ 0.78
SCARB1-210ENST00000545493 OLAHQ9NV23 265 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 RNF14Q9UBS8 474 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 ZFP69BQ9UJL9 534 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 SLC22A14Q9Y267 594 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 DYRK1BQ9Y463 629 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 OARD1Q9Y530 152 aa19.9■□□□□ 0.78
SCARB1-210ENST00000545493 RAD51CO43502 376 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 SERPIND1P05546 499 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 SLC6A12P48065 614 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 AGTR2P50052 363 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 RGS1Q08116 209 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 HYAL2Q12891 473 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 ABRAXAS2Q15018 415 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 C4orf17Q53FE4 359 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 ADAMTSL2Q86TH1 951 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 UTP15Q8TED0 518 aaKnown RBP19.89■□□□□ 0.77
SCARB1-210ENST00000545493 ANKRD7Q92527 254 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 NPAS2Q99743 824 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 TEX15Q9BXT5 2789 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 UNKQ9C0B0 810 aaKnown RBP19.89■□□□□ 0.77
SCARB1-210ENST00000545493 SLC6A16Q9GZN6 736 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 AICDAQ9GZX7 198 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.89■□□□□ 0.773e-9■■□□□ 12.2
SCARB1-210ENST00000545493 DPH5Q9H2P9 285 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 POPDC3Q9HBV1 291 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 NSMCE4AQ9NXX6 385 aa19.89■□□□□ 0.77
SCARB1-210ENST00000545493 OR5H15A6NDH6 313 aa19.88■□□□□ 0.77
SCARB1-210ENST00000545493 CXorf49A8MYA2 514 aaPredicted RBP19.88■□□□□ 0.77
SCARB1-210ENST00000545493 FHP07954 510 aa19.88■□□□□ 0.77
SCARB1-210ENST00000545493 SSTR1P30872 391 aa19.88■□□□□ 0.77
SCARB1-210ENST00000545493 AHRP35869 848 aa19.88■□□□□ 0.77
SCARB1-210ENST00000545493 C2orf54Q08AI8 447 aa19.88■□□□□ 0.77
SCARB1-210ENST00000545493 C18orf21Q32NC0 220 aaPredicted RBP19.88■□□□□ 0.77
SCARB1-210ENST00000545493 ABHD17BQ5VST6 288 aa19.88■□□□□ 0.77
SCARB1-210ENST00000545493 FCRLBQ6BAA4 426 aa19.88■□□□□ 0.77
SCARB1-210ENST00000545493 PAPD4Q6PIY7 484 aaKnown RBP19.88■□□□□ 0.77
SCARB1-210ENST00000545493 NXPE4Q6UWF7 544 aa19.88■□□□□ 0.77
SCARB1-210ENST00000545493 KLHDC8AQ8IYD2 350 aa19.88■□□□□ 0.77
SCARB1-210ENST00000545493 PLPP5Q8NEB5 264 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms