RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 TRAPPC9Q96Q05 1148 aa13.17□□□□□ -0.3
SCARB1-209ENST00000545305 F2RL3Q96RI0 385 aa13.17□□□□□ -0.3
SCARB1-209ENST00000545305 CCDC3Q9BQI4 270 aa13.17□□□□□ -0.3
SCARB1-209ENST00000545305 SLC25A23Q9BV35 468 aa13.17□□□□□ -0.3
SCARB1-209ENST00000545305 EBPLQ9BY08 206 aa13.17□□□□□ -0.3
SCARB1-209ENST00000545305 NLNQ9BYT8 704 aa13.17□□□□□ -0.3
SCARB1-209ENST00000545305 ACTR5Q9H9F9 607 aaPredicted RBP13.17□□□□□ -0.3
SCARB1-209ENST00000545305 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■□□□ 12.2
SCARB1-209ENST00000545305 DLGAP4Q9Y2H0 992 aa13.17□□□□□ -0.3
SCARB1-209ENST00000545305 CABIN1Q9Y6J0 2220 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 LOC100653049A0A140TA62 436 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 GNG14A0A1W2PPG7 69 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 LNP1A1A4G5 178 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 FAM234BA2RU67 622 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 EME2A4GXA9 379 aaPredicted RBP13.16□□□□□ -0.3
SCARB1-209ENST00000545305 URADA6NGE7 173 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 SLC9B1P1A6NJY1 282 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 BBIP1A8MTZ0 92 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 SAP18O00422 153 aaKnown RBP13.16□□□□□ -0.3
SCARB1-209ENST00000545305 CTSVO60911 334 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 RASSF9O75901 435 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 KRT34O76011 436 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 ANXA4P09525 319 aaPredicted RBP13.16□□□□□ -0.3
SCARB1-209ENST00000545305 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
SCARB1-209ENST00000545305 ST6GAL1P15907 406 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 JAK1P23458 1154 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 MLLT3P42568 568 aaPredicted RBP13.16□□□□□ -0.3
SCARB1-209ENST00000545305 ASMTP46597 345 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 CPA2P48052 419 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 GFERP55789 205 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 UFM1P61960 85 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 ZNF763Q0D2J5 394 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 STX5Q13190 355 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 PWP1Q13610 501 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 ZIC1Q15915 447 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 NUDT13Q86X67 352 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 GLB1L3Q8NCI6 653 aaPredicted RBP13.16□□□□□ -0.3
SCARB1-209ENST00000545305 SRFBP1Q8NEF9 429 aaKnown RBP13.16□□□□□ -0.3
SCARB1-209ENST00000545305 OR9I1Q8NGQ6 314 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 CDC26Q8NHZ8 85 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 NT5CQ8TCD5 201 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 STARD8Q92502 1023 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 TCTN2Q96GX1 697 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 TSSK3Q96PN8 268 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 MAP3K3Q99759 626 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 LRFN3Q9BTN0 628 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 REXO4Q9GZR2 422 aaKnown RBP13.16□□□□□ -0.3
SCARB1-209ENST00000545305 IRF2BPLQ9H1B7 796 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 KCNH6Q9H252 994 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 DNAAF2Q9NVR5 837 aaKnown RBP13.16□□□□□ -0.3
SCARB1-209ENST00000545305 SOHLH2Q9NX45 425 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 SIRT5Q9NXA8 310 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 MCM8Q9UJA3 840 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 PILRAQ9UKJ1 303 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 MAPRE3Q9UPY8 281 aa13.16□□□□□ -0.3
SCARB1-209ENST00000545305 MN1Q10571 1320 aaPredicted RBP13.15□□□□□ -0.3
SCARB1-209ENST00000545305 LY6G6EA0A0G2JKS1 128 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 DYTNA2CJ06 578 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 PLPP1O14494 284 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 FLRT2O43155 660 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 ERI3O43414 337 aaKnown RBP13.15□□□□□ -0.3
SCARB1-209ENST00000545305 B4GAT1O43505 415 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 PRMT3O60678 531 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 STATHP02808 62 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 ZNF806P0C7X5 589 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 T-ENOLP0DO92 83 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 CKMT1AP12532 417 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 HNRNPH1P31943 449 aaKnown RBP13.15□□□□□ -0.3
SCARB1-209ENST00000545305 SSR2P43308 183 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 ARL4DP49703 201 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 POLR2JP52435 117 aaKnown RBP13.15□□□□□ -0.3
SCARB1-209ENST00000545305 ARFIP1P53367 373 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 CLDN8P56748 225 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 NCALDP61601 193 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 PTGR1Q14914 329 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 SPRED3Q2MJR0 410 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 PROX2Q3B8N5 592 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 MMEL1Q495T6 779 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 FBXO42Q6P3S6 717 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 GALNT18Q6P9A2 607 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 TRIM40Q6P9F5 258 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 WDR74Q6RFH5 385 aaPredicted RBP13.15□□□□□ -0.3
SCARB1-209ENST00000545305 VN1R4Q7Z5H5 301 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 SUMF1Q8NBK3 374 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 PRSS33Q8NF86 280 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 CLHC1Q8NHS4 586 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 TSPEARQ8WU66 669 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 OR2A5Q96R48 311 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 RTKNQ9BST9 563 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 SYNDIG1Q9H7V2 258 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 COPS7BQ9H9Q2 264 aaPredicted RBP13.15□□□□□ -0.3
SCARB1-209ENST00000545305 NCDNQ9UBB6 729 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 KLHL3Q9UH77 587 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 BAIAP2L1Q9UHR4 511 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 ADAM29Q9UKF5 820 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 U3KQA8 63 aa13.15□□□□□ -0.3
SCARB1-209ENST00000545305 LRIT2A6NDA9 550 aa13.14□□□□□ -0.31
SCARB1-209ENST00000545305 CCDC154A6NI56 674 aa13.14□□□□□ -0.31
SCARB1-209ENST00000545305 B2RBV5 119 aa13.14□□□□□ -0.31
SCARB1-209ENST00000545305 ANGPT2O15123 496 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms