RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 NXPE4Q6UWF7 544 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CEP68Q76N32 757 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 TRIM46Q7Z4K8 759 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 MILR1Q7Z6M3 343 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 AMIGO1Q86WK6 493 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 LAS2Q8IYD9 372 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SDR16C5Q8N3Y7 309 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 DPP10Q8N608 796 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 TMEM102Q8N9M5 508 aaPredicted RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ANKRD53Q8N9V6 530 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SUMF1Q8NBK3 374 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 TNIP2Q8NFZ5 429 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 OR4E2Q8NGC2 313 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 METTL6Q8TCB7 284 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SLC5A11Q8WWX8 675 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 TCEAL3Q969E4 200 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ATP6V1E2Q96A05 226 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 EME1Q96AY2 570 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CXorf40BQ96DE9 158 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SLC45A3Q96JT2 553 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SH3GL1Q99961 368 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ACAT2Q9BWD1 397 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ACPTQ9BZG2 426 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 EPB41L1Q9H4G0 881 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 ACTR8Q9H981 624 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 COPS7BQ9H9Q2 264 aaPredicted RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CCM2LQ9NUG4 571 aaPredicted RBP6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 MAP10Q9P2G4 905 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 SUSD2Q9UGT4 822 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 PADI4Q9UM07 663 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 CSNK1G3Q9Y6M4 447 aa6.72□□□□□ -1.33
HMGCS2-204ENST00000544913 GVINP1Q7Z2Y8 2422 aa6.71□□□□□ -1.33
HMGCS2-204ENST00000544913 DMXL1Q9Y485 3027 aa6.71□□□□□ -1.33
HMGCS2-204ENST00000544913 SMIM31A0A1B0GVY4 71 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 SERTM1A2A2V5 107 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 PIPSLA2A3N6 862 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 PABPN1LA6NDY0 278 aaKnown RBP6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 OR5K4A6NMS3 321 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 LSM1O15116 133 aaKnown RBP6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 RGS14O43566 566 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 PDYNP01213 254 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 LINGO3P0C6S8 592 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 C1GALT1C1LP0DN25 315 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 BMP2P12643 396 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 MYF5P13349 255 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 GNSP15586 552 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 PSMA4P25789 261 aaKnown RBP6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 HMOX2P30519 316 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 SHMT2P34897 504 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 NEK2P51955 445 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 POLR2JP52435 117 aaKnown RBP6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 SLC7A2P52569 658 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 CSNK1G2P78368 415 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 REEP5Q00765 189 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 MEF2AQ02078 507 aaPredicted RBP6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 IRF8Q02556 426 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 HHEXQ03014 270 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 CFHR1Q03591 330 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 PRDX1Q06830 199 aaKnown RBP6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 NR1D2Q14995 579 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 KIAA0040Q15053 153 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 DUOXA1Q1HG43 343 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 LRRC36Q1X8D7 754 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 XKR6Q5GH73 641 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 MTX3Q5HYI7 312 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 C6orf136Q5SQH8 315 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 C6orf132Q5T0Z8 1188 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 KIAA1614Q5VZ46 1190 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 LIPJQ5W064 366 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 TMPRSS11BQ86T26 416 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 TRIM73Q86UV7 250 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 GKN2Q86XP6 184 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 PTRH1Q86Y79 214 aaKnown RBP6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 EFCAB3Q8N7B9 438 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 ANKFN1Q8N957 763 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 PRSS33Q8NF86 280 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 OR2L3Q8NG85 312 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 OR7G3Q8NG95 312 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 SETD7Q8WTS6 366 aaKnown RBP6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 LCN9Q8WX39 176 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 RSC1A1Q92681 617 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 ZBTB18Q99592 522 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 RAB11FIP5Q9BXF6 653 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 UCK1Q9HA47 277 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 EIF3LQ9Y262 564 aaKnown RBP6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 KLHL20Q9Y2M5 609 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 ANGPTL3Q9Y5C1 460 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 KLK4Q9Y5K2 254 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 KCNE2Q9Y6J6 123 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 COLEC10Q9Y6Z7 277 aa6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 ASCC3Q8N3C0 2202 aaKnown RBP6.71□□□□□ -1.34
HMGCS2-204ENST00000544913 RIF1Q5UIP0 2472 aaKnown RBP6.7□□□□□ -1.34
HMGCS2-204ENST00000544913 MDC1Q14676 2089 aaKnown RBP6.7□□□□□ -1.34
HMGCS2-204ENST00000544913 LILRA5A6NI73 299 aa6.7□□□□□ -1.34
HMGCS2-204ENST00000544913 TXNDC9O14530 226 aa6.7□□□□□ -1.34
HMGCS2-204ENST00000544913 PRAMEF10O60809 474 aa6.7□□□□□ -1.34
HMGCS2-204ENST00000544913 GMNNO75496 209 aa6.7□□□□□ -1.34
HMGCS2-204ENST00000544913 KLHL18O94889 574 aa6.7□□□□□ -1.34
HMGCS2-204ENST00000544913 VIPP01282 170 aa6.7□□□□□ -1.34
HMGCS2-204ENST00000544913 UGT2B7P16662 529 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms