RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 CD274Q9NZQ7 290 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 C19orf25Q9UFG5 118 aaPredicted RBP12.45□□□□□ -0.42
CIT-214ENST00000544588 ZFP69BQ9UJL9 534 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 CSAG2Q9Y5P2 127 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 COPG1Q9Y678 874 aaKnown RBP12.45□□□□□ -0.42
CIT-214ENST00000544588 SLC22A7Q9Y694 548 aa12.45□□□□□ -0.42
CIT-214ENST00000544588 A8MUI8 341 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 PCDH17O14917 1159 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 B3GALT4O96024 378 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 S100BP04271 92 aaPredicted RBP12.44□□□□□ -0.42
CIT-214ENST00000544588 SERPINA7P05543 415 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 CELA2AP08217 269 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 PRR35P0CG20 571 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 ZNF888P0CJ79 500 aaPredicted RBP12.44□□□□□ -0.42
CIT-214ENST00000544588 ICAM2P13598 275 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 ALOX12P18054 663 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 SCTRP47872 440 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 RAB8AP61006 207 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 RAB10P61026 200 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 SKP1P63208 163 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 CDKL1Q00532 357 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 GUCY2DQ02846 1103 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 CDC16Q13042 620 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 CBLBQ13191 982 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 TGFBIQ15582 683 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 EIF2S3LQ2VIR3 472 aaKnown RBP12.44□□□□□ -0.42
CIT-214ENST00000544588 FBXO48Q5FWF7 155 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 FHL5Q5TD97 284 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 ZDHHC24Q6UX98 284 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 Q6ZS92 163 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 CYS1Q717R9 158 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 ABHD13Q7L211 337 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 CPEB2Q7Z5Q1 589 aaKnown RBP12.44□□□□□ -0.42
CIT-214ENST00000544588 PDSS2Q86YH6 399 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 FAM26EQ8N5C1 309 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 SNX31Q8N9S9 440 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 CATSPER1Q8NEC5 780 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 OR5T3Q8NGG3 340 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 PRR7Q8TB68 274 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 ESAMQ96AP7 390 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 RHBDF1Q96CC6 855 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 LMF1Q96S06 567 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 GPR22Q99680 433 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 RHBGQ9H310 441 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 PELI2Q9HAT8 420 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 PLA2G3Q9NZ20 509 aa12.44□□□□□ -0.42
CIT-214ENST00000544588 DYTNA2CJ06 578 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 URADA6NGE7 173 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 TCP11X1B4DZS4 312 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 CLGNO14967 610 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 CHST10O43529 356 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 B4GALT2O60909 372 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 SEC24DO94855 1032 aaPredicted RBP12.43□□□□□ -0.42
CIT-214ENST00000544588 AGFG2O95081 481 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 F10P00742 488 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 C1GALT1C1LP0DN25 315 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 GNAZP19086 355 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 AHRP35869 848 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 ATP6V0D1P61421 351 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 REEP5Q00765 189 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 MFAP5Q13361 173 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 MRPL49Q13405 166 aaKnown RBP12.43□□□□□ -0.42
CIT-214ENST00000544588 ELOAQ14241 798 aaKnown RBP12.43□□□□□ -0.42
CIT-214ENST00000544588 SLBPQ14493 270 aaKnown RBP eCLIP12.43□□□□□ -0.42
CIT-214ENST00000544588 PCOLCEQ15113 449 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 TLR1Q15399 786 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 NR6A1Q15406 480 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 NSDHLQ15738 373 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 UAP1Q16222 522 aaPredicted RBP12.43□□□□□ -0.42
CIT-214ENST00000544588 WHAMMP3Q1A5X7 153 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 BTBD16Q32M84 506 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 CRB2Q5IJ48 1285 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 B3GNTL1Q67FW5 361 aaPredicted RBP12.43□□□□□ -0.42
CIT-214ENST00000544588 TMEM205Q6UW68 189 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 LANCL3Q6ZV70 420 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 ZNF572Q7Z3I7 529 aaPredicted RBP12.43□□□□□ -0.42
CIT-214ENST00000544588 TCAIMQ8N3R3 496 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 AMER2Q8N7J2 671 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 TRPV3Q8NET8 790 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 OR1N1Q8NGS0 311 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 PPP4R1Q8TF05 950 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 TUBB6Q9BUF5 446 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.43□□□□□ -0.42
CIT-214ENST00000544588 ZNF700Q9H0M5 742 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 RNF112Q9ULX5 631 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 NBASA2RRP1 2371 aa12.43□□□□□ -0.42
CIT-214ENST00000544588 LOC102723996A0A087X1L8 192 aa12.42□□□□□ -0.42
CIT-214ENST00000544588 PSMD12O00232 456 aaPredicted RBP12.42□□□□□ -0.42
CIT-214ENST00000544588 CCNT2O60583 730 aaKnown RBP12.42□□□□□ -0.42
CIT-214ENST00000544588 GALR3O60755 368 aaPredicted RBP12.42□□□□□ -0.42
CIT-214ENST00000544588 DNAJB6O75190 326 aa12.42□□□□□ -0.42
CIT-214ENST00000544588 ITGAMP11215 1152 aa12.42□□□□□ -0.42
CIT-214ENST00000544588 CD1DP15813 335 aa12.42□□□□□ -0.42
CIT-214ENST00000544588 GMPRP36959 345 aa12.42□□□□□ -0.42
CIT-214ENST00000544588 HSPA7P48741 367 aa12.42□□□□□ -0.42
CIT-214ENST00000544588 EFNA3P52797 238 aa12.42□□□□□ -0.42
CIT-214ENST00000544588 AP2B1P63010 937 aa12.42□□□□□ -0.42
CIT-214ENST00000544588 ZNF169Q14929 603 aaPredicted RBP12.42□□□□□ -0.42
CIT-214ENST00000544588 EFTUD2Q15029 972 aaKnown RBP eCLIP12.42□□□□□ -0.42
CIT-214ENST00000544588 OR4D1Q15615 310 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms