RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 Q6ZVL8 140 aa14.78□□□□□ -0.04
CNOT9-208ENST00000542068 NAGSQ8N159 534 aa14.78□□□□□ -0.04
CNOT9-208ENST00000542068 OR2AP1Q8NGE2 309 aa14.78□□□□□ -0.04
CNOT9-208ENST00000542068 C2orf15Q8WU43 125 aaKnown RBP14.78□□□□□ -0.04
CNOT9-208ENST00000542068 PDLIM5Q96HC4 596 aaKnown RBP14.78□□□□□ -0.04
CNOT9-208ENST00000542068 IL4I1Q96RQ9 567 aa14.78□□□□□ -0.04
CNOT9-208ENST00000542068 NIPSNAP1Q9BPW8 284 aa14.78□□□□□ -0.04
CNOT9-208ENST00000542068 NTMT1Q9BV86 223 aa14.78□□□□□ -0.04
CNOT9-208ENST00000542068 NOX1Q9Y5S8 564 aa14.78□□□□□ -0.04
CNOT9-208ENST00000542068 LOC110117498-PIK3R3F6TDL0 507 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 NDUFB5O43674 189 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 PCDH7O60245 1069 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 MED26O95402 600 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 CKMT1AP12532 417 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 CRTC1Q6UUV9 634 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 DDX53Q86TM3 631 aaKnown RBP14.77□□□□□ -0.04
CNOT9-208ENST00000542068 TMEM25Q86YD3 366 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 DCAF4L2Q8NA75 395 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 VANGL1Q8TAA9 524 aaPredicted RBP14.77□□□□□ -0.04
CNOT9-208ENST00000542068 CNPPD1Q9BV87 410 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 MMP27Q9H306 513 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 MS4A12Q9NXJ0 267 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 SDK1Q7Z5N4 2213 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 NUAK1O60285 661 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 APOA1P02647 267 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 RPLP0P05388 317 aaKnown RBP14.77□□□□□ -0.04
CNOT9-208ENST00000542068 ACVR2AP27037 513 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 BMPR1AP36894 532 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 PREPP48147 710 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 SNRPD1P62314 119 aaKnown RBP14.77□□□□□ -0.04
CNOT9-208ENST00000542068 RACK1P63244 317 aaKnown RBP14.77□□□□□ -0.04
CNOT9-208ENST00000542068 IFITM2Q01629 132 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 SYTL3Q4VX76 610 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 FRG2Q64ET8 278 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 USP45Q70EL2 814 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 GAREM2Q75VX8 874 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 C11orf74Q86VG3 221 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 CYP4Z2PQ8N1L4 340 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 OR10G2Q8NGC3 310 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 FBLIM1Q8WUP2 373 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 ZNF486Q96H40 463 aaPredicted RBP14.77□□□□□ -0.04
CNOT9-208ENST00000542068 NEDD4LQ96PU5 975 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 FRG2BQ96QU4 278 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 TCF25Q9BQ70 676 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 ELAC1Q9H777 363 aaKnown RBP14.77□□□□□ -0.04
CNOT9-208ENST00000542068 B4GALT6Q9UBX8 382 aa14.77□□□□□ -0.04
CNOT9-208ENST00000542068 IDH3BO43837 385 aa14.77□□□□□ -0.05
CNOT9-208ENST00000542068 SOD2P04179 222 aa14.77□□□□□ -0.05
CNOT9-208ENST00000542068 FEN1P39748 380 aaKnown RBP14.77□□□□□ -0.05
CNOT9-208ENST00000542068 MAGEA2P43356 314 aa14.77□□□□□ -0.05
CNOT9-208ENST00000542068 ACSM2AQ08AH3 577 aa14.77□□□□□ -0.05
CNOT9-208ENST00000542068 ACSM2BQ68CK6 577 aa14.77□□□□□ -0.05
CNOT9-208ENST00000542068 ZNF852Q6ZMS4 543 aa14.77□□□□□ -0.05
CNOT9-208ENST00000542068 P2RY13Q9BPV8 354 aa14.77□□□□□ -0.05
CNOT9-208ENST00000542068 PRRG3Q9BZD7 231 aa14.77□□□□□ -0.05
CNOT9-208ENST00000542068 KIAA0513O60268 411 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 PRPS2P11908 318 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 ETFAP13804 333 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 AMD1P17707 334 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 IER5LQ5T953 404 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 TMC5Q6UXY8 1006 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 USP43Q70EL4 1123 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 LILRA3Q8N6C8 439 aaPredicted RBP14.76□□□□□ -0.05
CNOT9-208ENST00000542068 ING5Q8WYH8 240 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 CTRCQ99895 268 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 HOXD1Q9GZZ0 328 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 TMEM45AQ9NWC5 275 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 SPASTQ9UBP0 616 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 PCDHGB6Q9Y5F9 930 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 OR56A5P0C7T3 313 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 LRRC74AQ0VAA2 488 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 EXOC3L2Q2M3D2 409 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 BCL7AQ4VC05 210 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 NXNL2Q5VZ03 156 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 EIF3MQ7L2H7 374 aaKnown RBP14.76□□□□□ -0.05
CNOT9-208ENST00000542068 LGI4Q8N135 537 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 MYDGFQ969H8 173 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 CCM2Q9BSQ5 444 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 WRAP53Q9BUR4 548 aaKnown RBP14.76□□□□□ -0.05
CNOT9-208ENST00000542068 LINC00597Q9H2U6 94 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 BRD9Q9H8M2 597 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 MAP4K5Q9Y4K4 846 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 C8AP07357 584 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 ADORA3P0DMS8 318 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 OR2B6P58173 313 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 NAE1Q13564 534 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 STARD3Q14849 445 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 COX20Q5RI15 118 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 KLHL17Q6TDP4 642 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 PLPP6Q8IY26 295 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 C1orf52Q8N6N3 182 aaKnown RBP14.76□□□□□ -0.05
CNOT9-208ENST00000542068 WDR36Q8NI36 951 aaKnown RBP14.76□□□□□ -0.05
CNOT9-208ENST00000542068 ZNF296Q8WUU4 475 aaPredicted RBP14.76□□□□□ -0.05
CNOT9-208ENST00000542068 IPCEF1Q8WWN9 437 aaPredicted RBP14.76□□□□□ -0.05
CNOT9-208ENST00000542068 ZFYVE19Q96K21 471 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 ACAT2Q9BWD1 397 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 SUV39H2Q9H5I1 410 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 CPNE5Q9HCH3 593 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 ADPRHL2Q9NX46 363 aa14.76□□□□□ -0.05
CNOT9-208ENST00000542068 CLDN24A6NM45 220 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms