RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 CDK20Q8IZL9 346 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 NAGSQ8N159 534 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 CYP4Z2PQ8N1L4 340 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 SLC15A4Q8N697 577 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 PEX13Q92968 403 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 DNAJA3Q96EY1 480 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 GFM1Q96RP9 751 aaKnown RBP15.55■□□□□ 0.08
VARS2-212ENST00000542001 OR51V1Q9H2C8 321 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 IL20RAQ9UHF4 553 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 SSR3Q9UNL2 185 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 CEPT1Q9Y6K0 416 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 CTGFP29279 349 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 HLA-FP30511 346 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 HNMTP50135 292 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 TSTQ16762 297 aaKnown RBP15.55■□□□□ 0.08
VARS2-212ENST00000542001 HSD11B1LQ7Z5J1 315 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 VRK3Q8IV63 474 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 DRAXINQ8NBI3 349 aaPredicted RBP15.55■□□□□ 0.08
VARS2-212ENST00000542001 TEX47Q8TBZ9 253 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 ITFG2Q969R8 447 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 SCRN2Q96FV2 425 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 CMTM7Q96FZ5 175 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 DIRAS2Q96HU8 199 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 SLC46A2Q9BY10 475 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 SBF2Q86WG5 1849 aa15.55■□□□□ 0.08
VARS2-212ENST00000542001 WASH4PA8MWX3 477 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 TLX2O43763 284 aaPredicted RBP15.54■□□□□ 0.08
VARS2-212ENST00000542001 PLOD3O60568 738 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 BMP10O95393 424 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 IL3P08700 152 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 SAGP10523 405 aaPredicted RBP15.54■□□□□ 0.08
VARS2-212ENST00000542001 IGFBP4P22692 258 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 NCBP2P52298 156 aaKnown RBP eCLIP15.54■□□□□ 0.089e-10■□□□□ 10.4
VARS2-212ENST00000542001 DUS1LQ6P1R4 473 aaKnown RBP15.54■□□□□ 0.08
VARS2-212ENST00000542001 GLYATL1Q969I3 302 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 WDR12Q9GZL7 423 aaKnown RBP15.54■□□□□ 0.08
VARS2-212ENST00000542001 KCNH6Q9H252 994 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 KCNK12Q9HB15 430 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 NKIRAS2Q9NYR9 191 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 COMMD3Q9UBI1 195 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 RPS6KB2Q9UBS0 482 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 ZNF232Q9UNY5 417 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 COL11A2P13942 1736 aaPredicted RBP15.54■□□□□ 0.08
VARS2-212ENST00000542001 A0A0J9YVX5 310 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 H3BMQ9 156 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 HOXD8P13378 290 aaPredicted RBP15.54■□□□□ 0.08
VARS2-212ENST00000542001 PFKLP17858 780 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 TBPL1P62380 186 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 HEPACAMQ14CZ8 416 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 MANEALQ5VSG8 457 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 BRAT1Q6PJG6 821 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 SLC22A16Q86VW1 577 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 PELI3Q8N2H9 469 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 TCEANCQ8N8B7 351 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 GTF2H4Q92759 462 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 COG8Q96MW5 612 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 SLC29A3Q9BZD2 475 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 C8orf4Q9NR00 106 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 ARMC1Q9NVT9 282 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 CXXC1Q9P0U4 656 aaPredicted RBP15.54■□□□□ 0.08
VARS2-212ENST00000542001 RIMKLBQ9ULI2 386 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 CACNA1IQ9P0X4 2223 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 ALPK2Q86TB3 2170 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 SLC1A7O00341 560 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 LSM1O15116 133 aaKnown RBP15.54■□□□□ 0.08
VARS2-212ENST00000542001 PDPK1O15530 556 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 OR10H2O60403 315 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 PRLP01236 227 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 PSMA1P25786 263 aaKnown RBP15.54■□□□□ 0.08
VARS2-212ENST00000542001 TALDO1P37837 337 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 CDKN2CP42773 168 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 TGM3Q08188 693 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 NFATC3Q12968 1075 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 CRB2Q5IJ48 1285 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 NEK5Q6P3R8 708 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 KRT74Q7RTS7 529 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 BHLHA9Q7RTU4 235 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 CACTIN-AS1Q8N1I8 211 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 CPA6Q8N4T0 437 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 DPP10Q8N608 796 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 CIDECQ96AQ7 238 aaPredicted RBP15.54■□□□□ 0.08
VARS2-212ENST00000542001 ZSCAN5AQ9BUG6 496 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 TMEM121BQ9BXQ6 578 aaPredicted RBP15.54■□□□□ 0.08
VARS2-212ENST00000542001 ZNF282Q9UDV7 671 aaPredicted RBP15.54■□□□□ 0.08
VARS2-212ENST00000542001 ZNF780BQ9Y6R6 833 aa15.54■□□□□ 0.08
VARS2-212ENST00000542001 C9P02748 559 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 CTSEP14091 401 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 MYF6P23409 242 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 HLCSP50747 726 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 DSTNP60981 165 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 HYAL2Q12891 473 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 RBM48Q5RL73 367 aaKnown RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 SNAP47Q5SQN1 464 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 OR9Q2Q8NGE9 314 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 GPR150Q8NGU9 434 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 LINC01599Q8WXQ3 324 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 FCRL4Q96PJ5 515 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 SPHK2Q9NRA0 654 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 DPP7Q9UHL4 492 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 PTPRZ1P23471 2315 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms