RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 SYT16Q17RD7 645 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 CMPK2Q5EBM0 449 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 WASHC2DQ5SRD0 308 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 NCBP2-AS2Q69YL0 99 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 ZNF585AQ6P3V2 769 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 PIGWQ7Z7B1 504 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 PPIL6Q8IXY8 311 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 ANKRD42Q8N9B4 389 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 CCNYQ8ND76 341 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 OR52N2Q8NGI0 321 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 ZNF398Q8TD17 642 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 MGARPQ8TDB4 240 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 HAUS1Q96CS2 278 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 ZNF317Q96PQ6 595 aaPredicted RBP9.19□□□□□ -0.94
CHFR-220ENST00000541817 ELAC2Q9BQ52 826 aaKnown RBP9.19□□□□□ -0.94
CHFR-220ENST00000541817 PHACTR1Q9C0D0 580 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 ATG10Q9H0Y0 220 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 DEFB127Q9H1M4 99 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 FAM96AQ9H5X1 160 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 MVB12BQ9H7P6 319 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 COG4Q9H9E3 785 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 VPS37BQ9H9H4 285 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 SENP1Q9P0U3 644 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 TRPC4Q9UBN4 977 aa9.19□□□□□ -0.94
CHFR-220ENST00000541817 LOC105369274A0A096LPK9 316 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 LOC102723532A0A0G2JNH3 316 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 HYKKA2RU49 373 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 OR2W5A6NFC9 320 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 SLC16A5O15375 505 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 NRP2O60462 931 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 SUN1O94901 812 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 GLI4P10075 376 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 SHMT2P34897 504 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 PCK1P35558 622 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 CHRNA4P43681 627 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 ZNF135P52742 658 aaPredicted RBP9.18□□□□□ -0.94
CHFR-220ENST00000541817 EIF3EP60228 445 aaKnown RBP9.18□□□□□ -0.94
CHFR-220ENST00000541817 DYNLT1P63172 113 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 SLC25A11Q02978 314 aaKnown RBP9.18□□□□□ -0.94
CHFR-220ENST00000541817 KRTAP1-1Q07627 177 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 SLC10A2Q12908 348 aaPredicted RBP9.18□□□□□ -0.94
CHFR-220ENST00000541817 PDIA2Q13087 525 aaKnown RBP9.18□□□□□ -0.94
CHFR-220ENST00000541817 MEP1AQ16819 746 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 KRTAP24-1Q3LI83 254 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 BCL7AQ4VC05 210 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 UBAP2Q5T6F2 1119 aaKnown RBP9.18□□□□□ -0.94
CHFR-220ENST00000541817 RNASEH2BQ5TBB1 312 aaKnown RBP9.18□□□□□ -0.94
CHFR-220ENST00000541817 FRMPD2BQ6IN97 320 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 FIGLAQ6QHK4 219 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 LANCL3Q6ZV70 420 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 ACAD11Q709F0 780 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 TDRPQ86YL5 185 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 PSTKQ8IV42 348 aaKnown RBP9.18□□□□□ -0.94
CHFR-220ENST00000541817 MAP7D3Q8IWC1 876 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 OR4N4Q8N0Y3 316 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 CNPY4Q8N129 248 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 SLC25A41Q8N5S1 370 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 MAPK1IP1LQ8NDC0 245 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 LINC01560Q8TB33 94 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 SLC35B2Q8TB61 432 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 ACTL9Q8TC94 416 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 HM13Q8TCT9 377 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.18□□□□□ -0.94
CHFR-220ENST00000541817 DENND1AQ8TEH3 1009 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 FAM222BQ8WU58 562 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 CKAP2Q8WWK9 683 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 PERPQ96FX8 193 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 MAGEB18Q96M61 343 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 MENTQ9BUN1 341 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 IL1RAPL1Q9NZN1 696 aa9.18□□□□□ -0.94
CHFR-220ENST00000541817 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.18□□□□□ -0.94
CHFR-220ENST00000541817 LOC102723996A0A087X1L8 192 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 A0A1W2PQ72 361 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 C3orf70A6NLC5 250 aaPredicted RBP9.17□□□□□ -0.94
CHFR-220ENST00000541817 POC1B-GALNT4F8VUJ3 575 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 APOC4-APOC2K7ER74 178 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 PRMT3O60678 531 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 SMPD2O60906 423 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 SLC25A12O75746 678 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 NDST3O95803 873 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 IFNA2P01563 188 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 APOC2P02655 101 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 GSTA1P08263 222 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 ZSCAN5DPP0CG00 497 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 ICAM2P13598 275 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 ETS1P14921 441 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 PECAM1P16284 738 aaPredicted RBP9.17□□□□□ -0.94
CHFR-220ENST00000541817 KRT15P19012 456 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 STIP1P31948 543 aaKnown RBP9.17□□□□□ -0.94
CHFR-220ENST00000541817 HMGCLP35914 325 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 GBE1Q04446 702 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 KRT81Q14533 505 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 PDK2Q15119 407 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 TAZQ16635 292 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 KLHL38Q2WGJ6 581 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 FAM214AQ32MH5 1076 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 GXYLT1Q4G148 440 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 H3F3CQ6NXT2 135 aa9.17□□□□□ -0.94
CHFR-220ENST00000541817 DARS2Q6PI48 645 aaKnown RBP9.17□□□□□ -0.94
CHFR-220ENST00000541817 TMEM205Q6UW68 189 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms