RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 GLB1L3Q8NCI6 653 aaPredicted RBP9.2□□□□□ -0.94
TTC39C-203ENST00000540918 SMPDL3BQ92485 455 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 DTD2Q96FN9 168 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 PHF12Q96QT6 1004 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 ADI1Q9BV57 179 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 GSDMCQ9BYG8 508 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 EPB41L1Q9H4G0 881 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 CUEDC1Q9NWM3 386 aaPredicted RBP9.2□□□□□ -0.94
TTC39C-203ENST00000540918 AKAP7Q9P0M2 348 aaPredicted RBP9.2□□□□□ -0.94
TTC39C-203ENST00000540918 PCDHB11Q9Y5F2 797 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 LAMA2P24043 3122 aaKnown RBP9.2□□□□□ -0.94
TTC39C-203ENST00000540918 REM1O75628 298 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 ALOX5P09917 674 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 ZDHHC11BP0C7U3 371 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 ETFAP13804 333 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 PRDX6P30041 224 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 SH3BGRP55822 239 aaPredicted RBP9.2□□□□□ -0.94
TTC39C-203ENST00000540918 CDK3Q00526 305 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 TARDBPQ13148 414 aaKnown RBP eCLIP9.2□□□□□ -0.94
TTC39C-203ENST00000540918 AMIGO1Q86WK6 493 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 LSMEM2Q8N112 164 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 ZNF480Q8WV37 535 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 SH3YL1Q96HL8 342 aaPredicted RBP9.2□□□□□ -0.94
TTC39C-203ENST00000540918 BIRC8Q96P09 236 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 FCRL4Q96PJ5 515 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 OSBPL11Q9BXB4 747 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 LMAN2LQ9H0V9 348 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 ZIM2Q9NZV7 527 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 HCN3Q9P1Z3 774 aa9.2□□□□□ -0.94
TTC39C-203ENST00000540918 MRPS7Q9Y2R9 242 aaKnown RBP9.2□□□□□ -0.94
TTC39C-203ENST00000540918 MYL12BO14950 172 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 KIF1CO43896 1103 aaKnown RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 CREG1O75629 220 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 APOL3O95236 402 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 HOXC8P31273 242 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 HOXC13P31276 330 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 MPIP34949 423 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 MLLT3P42568 568 aaPredicted RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 SERPINB10P48595 397 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 RPL34P49207 117 aaKnown RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 UGT2B15P54855 530 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 MTTPP55157 894 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 CDC42P60953 191 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 PRR5P85299 388 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 CDK6Q00534 326 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 ZNF852Q6ZMS4 543 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 MAVSQ7Z434 540 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 KBTBD6Q86V97 674 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 ZSWIM9Q86XI8 627 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 SETD9Q8NE22 299 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 UTP4Q969X6 686 aaKnown RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 CIDECQ96AQ7 238 aaPredicted RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 ZNF689Q96CS4 500 aaPredicted RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 TMEM168Q9H0V1 697 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 ALKBH4Q9NXW9 302 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 CLEC4AQ9UMR7 237 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 YBX2Q9Y2T7 364 aaKnown RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 ARFGEF1Q9Y6D6 1849 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 A0A1B0GTL3 188 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 BCKDKO14874 412 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 ERN1O75460 977 aaKnown RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 RSL1D1O76021 490 aaKnown RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 GADD45GO95257 159 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 BCL10O95999 233 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 EGFP01133 1207 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 HNRNPCP07910 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 MYL12AP19105 171 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 GSTT1P30711 240 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 PTPN5P54829 565 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 PIGFQ07326 219 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 ZNF763Q0D2J5 394 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 GNA13Q14344 377 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 ZNF267Q14586 743 aaPredicted RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 NCF4Q15080 339 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 SNAPC1Q16533 368 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 WSCD2Q2TBF2 565 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 COMMD6Q7Z4G1 85 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 SATL1Q86VE3 508 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 PATE1Q8WXA2 126 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 TBX5Q99593 518 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 OR51V1Q9H2C8 321 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 MEAF6Q9HAF1 191 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 MBNL1Q9NR56 388 aaKnown RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 AIG1Q9NVV5 245 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 TVP23BQ9NYZ1 205 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 TRBC2A0A5B9 178 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 FADS2P1A8MWK0 482 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 NME4O00746 187 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 AP2A2O94973 939 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 CCNDBP1O95273 360 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 ALDOCP09972 364 aaKnown RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 ITGB7P26010 798 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 CSNK1EP49674 416 aaKnown RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 NUP107P57740 925 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 CTBSQ01459 385 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 DUOXA1Q1HG43 343 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 OGFOD2Q6N063 350 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 ADIPOR2Q86V24 386 aa9.19□□□□□ -0.94
TTC39C-203ENST00000540918 MEX3DQ86XN8 651 aaKnown RBP9.19□□□□□ -0.94
TTC39C-203ENST00000540918 OR8H2Q8N162 312 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms