RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 PPP1CAP62136 330 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 HHEXQ03014 270 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 PWP1Q13610 501 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 COL9A2Q14055 689 aaPredicted RBP23.47■■□□□ 1.35
TTC3-225ENST00000540756 SAMD4BQ5PRF9 694 aaKnown RBP23.47■■□□□ 1.35
TTC3-225ENST00000540756 MAMSTRQ6ZN01 415 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 ZNF438Q7Z4V0 828 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 MSRB3Q8IXL7 192 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.47■■□□□ 1.355e-7■□□□□ 9.4
TTC3-225ENST00000540756 STMN2Q93045 179 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 REXO4Q9GZR2 422 aaKnown RBP23.47■■□□□ 1.35
TTC3-225ENST00000540756 TWSG1Q9GZX9 223 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 KLHL31Q9H511 634 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 PIF1Q9H611 641 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 LHX9Q9NQ69 397 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 SIRT5Q9NXA8 310 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 SLC25A37Q9NYZ2 338 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 ERVK-11Q9UQG0 969 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 A0A0G2JN53 185 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 GABRR3A8MPY1 467 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 LAMP1P11279 417 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 PIM1P11309 404 aaPredicted RBP23.47■■□□□ 1.35
TTC3-225ENST00000540756 COX7A2P14406 83 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 CDKN2CP42773 168 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 WNT3P56703 355 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 MTPNP58546 118 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 FOXM1Q08050 763 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 FLOT2Q14254 428 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 UBE3DQ7Z6J8 389 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 FAM9CQ8IZT9 166 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 MMP21Q8N119 569 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 SLC26A7Q8TE54 656 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 CGREF1Q99674 301 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 UCKL1Q9NWZ5 548 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 ACTR10Q9NZ32 417 aa23.47■■□□□ 1.35
TTC3-225ENST00000540756 OR5K4A6NMS3 321 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 BCAT2O15382 392 aaPredicted RBP23.46■■□□□ 1.35
TTC3-225ENST00000540756 PRAMEF10O60809 474 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 C1QCP02747 245 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 GSNP06396 782 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 MAGP20916 626 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 TPP2P29144 1249 aaPredicted RBP23.46■■□□□ 1.35
TTC3-225ENST00000540756 ELOCQ15369 112 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 CCDC6Q16204 474 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 PRMT9Q6P2P2 845 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 AMER3Q8N944 861 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 BHLHE22Q8NFJ8 381 aaPredicted RBP23.46■■□□□ 1.35
TTC3-225ENST00000540756 EDAQ92838 391 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 MIEF2Q96C03 454 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 PITHD1Q9GZP4 211 aaPredicted RBP23.46■■□□□ 1.35
TTC3-225ENST00000540756 IKZF5Q9H5V7 419 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 ADGRE2Q9UHX3 823 aa23.46■■□□□ 1.35
TTC3-225ENST00000540756 SCAMP2O15127 329 aaKnown RBP23.45■■□□□ 1.35
TTC3-225ENST00000540756 KCNH1O95259 989 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 TDGF1P13385 188 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 BSGP35613 385 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 KIR3DL1P43629 444 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 LSSP48449 732 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 ZNF763Q0D2J5 394 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 TRIM25Q14258 630 aaKnown RBP23.45■■□□□ 1.35
TTC3-225ENST00000540756 KIR2DS3Q14952 304 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 TMEM26Q6ZUK4 368 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 IFNEQ86WN2 208 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 ENDOVQ8N8Q3 282 aaKnown RBP23.45■■□□□ 1.35
TTC3-225ENST00000540756 C16orf78Q8WTQ4 265 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 NELL1Q92832 810 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 IER2Q9BTL4 223 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 DCLRE1BQ9H816 532 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 EVA1BQ9NVM1 165 aa23.45■■□□□ 1.35
TTC3-225ENST00000540756 TMEM131Q92545 1883 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 C4orf51C9J302 202 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 SCN2BO60939 215 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 TYRP1P17643 537 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 GRK3P35626 688 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 TAS2R50P59544 299 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 HYAL2Q12891 473 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 DEFB133Q30KQ1 61 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 GPR180Q86V85 440 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 PAQR7Q86WK9 346 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 MAML2Q8IZL2 1156 aaPredicted RBP23.45■■□□□ 1.34
TTC3-225ENST00000540756 ZNF548Q8NEK5 533 aaPredicted RBP23.45■■□□□ 1.34
TTC3-225ENST00000540756 ASB9Q96DX5 294 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 TMEM74BQ9NUR3 256 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 HRASLS2Q9NWW9 162 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 SUCOQ9UBS9 1254 aaKnown RBP23.45■■□□□ 1.34
TTC3-225ENST00000540756 PCDHB14Q9Y5E9 798 aa23.45■■□□□ 1.34
TTC3-225ENST00000540756 PI4KAP42356 2102 aa23.44■■□□□ 1.34
TTC3-225ENST00000540756 VILLO15195 856 aa23.44■■□□□ 1.34
TTC3-225ENST00000540756 BCAS2O75934 225 aaPredicted RBP23.44■■□□□ 1.34
TTC3-225ENST00000540756 CCNDBP1O95273 360 aa23.44■■□□□ 1.34
TTC3-225ENST00000540756 PVRP15151 417 aa23.44■■□□□ 1.34
TTC3-225ENST00000540756 PLA2G16P53816 162 aa23.44■■□□□ 1.34
TTC3-225ENST00000540756 PRSS53Q2L4Q9 553 aa23.44■■□□□ 1.34
TTC3-225ENST00000540756 ZNF385BQ569K4 471 aa23.44■■□□□ 1.34
TTC3-225ENST00000540756 DGLUCYQ7Z3D6 616 aa23.44■■□□□ 1.34
TTC3-225ENST00000540756 ZFPM2Q8WW38 1151 aa23.44■■□□□ 1.34
TTC3-225ENST00000540756 AURKBQ96GD4 344 aaPredicted RBP23.44■■□□□ 1.34
TTC3-225ENST00000540756 PAIP1Q9H074 479 aaKnown RBP23.44■■□□□ 1.34
TTC3-225ENST00000540756 EGFL7Q9UHF1 273 aa23.44■■□□□ 1.34
TTC3-225ENST00000540756 SNX7Q9UNH6 387 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms