RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 AUP1Q9Y679 476 aa2.8□□□□□ -1.96
MDM2-227ENST00000540709 NEDD4P46934 1319 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 RNF123Q5XPI4 1314 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 IGHV3-20A0A0C4DH32 117 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 A0A1B0GTH9 108 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 ARHGEF33A8MVX0 844 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 C17orf105B2RV13 164 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 E9PAM4 449 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 MYOGP15173 224 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 C4BPBP20851 252 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 RAB28P51157 221 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 RIDAP52758 137 aaKnown RBP2.79□□□□□ -1.96
MDM2-227ENST00000540709 CLDN15P56746 228 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 ACY1Q03154 408 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 BECN1Q14457 450 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 C3AR1Q16581 482 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 FHL5Q5TD97 284 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 LEMD1Q68G75 181 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 ENOSF1Q7L5Y1 443 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 CPEB2Q7Z5Q1 589 aaKnown RBP2.79□□□□□ -1.96
MDM2-227ENST00000540709 PCGF5Q86SE9 256 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 KRTAP11-1Q8IUC1 163 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 CROCCP3Q8IVE0 287 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 PHC2Q8IXK0 858 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 SLC22A15Q8IZD6 547 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 SSC4DQ8WTU2 575 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 HDAC11Q96DB2 347 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 RBM24Q9BX46 236 aaKnown RBP2.79□□□□□ -1.96
MDM2-227ENST00000540709 IL1RAPQ9NPH3 570 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 SLC12A6Q9UHW9 1150 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 PILRBQ9UKJ0 227 aa2.79□□□□□ -1.96
MDM2-227ENST00000540709 IL16Q14005 1332 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 A0A1W2PPW3 197 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 RPL37AP8A6NKH3 93 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 H3BMM5 538 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 HAT1O14929 419 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 MYBL1P10243 752 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 CD1DP15813 335 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 ACHEP22303 614 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 MTCP1P56278 107 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 TRA2BP62995 288 aaKnown RBP2.78□□□□□ -1.96
MDM2-227ENST00000540709 SRPXP78539 464 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 DLK1P80370 383 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 AIMP1Q12904 312 aaKnown RBP2.78□□□□□ -1.96
MDM2-227ENST00000540709 ITPK1Q13572 414 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 SIX1Q15475 284 aaPredicted RBP2.78□□□□□ -1.96
MDM2-227ENST00000540709 UPP1Q16831 310 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 CRY2Q49AN0 593 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 KRT80Q6KB66 452 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 PRSS55Q6UWB4 352 aaPredicted RBP2.78□□□□□ -1.96
MDM2-227ENST00000540709 Q71RC1 249 aaPredicted RBP2.78□□□□□ -1.96
MDM2-227ENST00000540709 PLPPR4Q7Z2D5 763 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 AMIGO1Q86WK6 493 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 Q8N7P7 452 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 AGAP11Q8TF27 550 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 ZIM3Q96PE6 472 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 SLF1Q9BQI6 1058 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 OCR1Q9BZK8 76 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 KCNK13Q9HB14 408 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 BCCIPQ9P287 314 aaKnown RBP eCLIP2.78□□□□□ -1.96
MDM2-227ENST00000540709 FBXL4Q9UKA2 621 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 TSPAN16Q9UKR8 245 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 TTLL3Q9Y4R7 772 aa2.78□□□□□ -1.96
MDM2-227ENST00000540709 PRRC2AP48634 2157 aaKnown RBP2.78□□□□□ -1.96
MDM2-227ENST00000540709 HCFC1P51610 2035 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 CROCCQ5TZA2 2017 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 TRGV8A0A0C4DH27 118 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 E5RGE8 158 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 MT-ND1P03886 318 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 THY1P04216 161 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 YES1P07947 543 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 FDPSP14324 419 aaKnown RBP2.77□□□□□ -1.97
MDM2-227ENST00000540709 CPT2P23786 658 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 LMO2P25791 158 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 EEF1DP29692 281 aaKnown RBP2.77□□□□□ -1.97
MDM2-227ENST00000540709 DUTP33316 252 aaKnown RBP2.77□□□□□ -1.97
MDM2-227ENST00000540709 LIMK1P53667 647 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 CLDN17P56750 224 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 TMEM44Q2T9K0 475 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 FAM182AQ5T1J6 154 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 ERMARDQ5T6L9 678 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 CST9LP1Q5W188 147 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 FUT10Q6P4F1 479 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 ENPP7Q6UWV6 458 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 MCM10Q7L590 875 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 KRT74Q7RTS7 529 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 C5orf24Q7Z6I8 188 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 CCDC60Q8IWA6 550 aaPredicted RBP2.77□□□□□ -1.97
MDM2-227ENST00000540709 KIAA1524Q8TCG1 905 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 CASP10Q92851 521 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 RFT1Q96AA3 541 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 RBM41Q96IZ5 413 aaKnown RBP2.77□□□□□ -1.97
MDM2-227ENST00000540709 CFAP57Q96MR6 1250 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 TAAR6Q96RI8 345 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 HNRNPABQ99729 332 aaKnown RBP2.77□□□□□ -1.97
MDM2-227ENST00000540709 STRADBQ9C0K7 418 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 FN3KQ9H479 309 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 PHPT1Q9NRX4 125 aaPredicted RBP2.77□□□□□ -1.97
MDM2-227ENST00000540709 TMOD3Q9NYL9 352 aa2.77□□□□□ -1.97
MDM2-227ENST00000540709 POLLQ9UGP5 575 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms