RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 SORBS1Q9BX66 1292 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 OR51E2Q9H255 320 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SP110Q9HB58 689 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 KLQ9UEF7 1012 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 TCAF1Q9Y4C2 921 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 TRIP11Q15643 1979 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 TDRD15B5MCY1 1934 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 IGLV3-10A0A075B6K4 115 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SMIM30A4D0T7 59 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 TSTD3H0UI37 97 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 BET1O15155 118 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 BUD23O43709 281 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SORBS2O94875 1100 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 POMCP01189 267 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 CKMT1AP12532 417 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SRCP12931 536 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 BRCC3P46736 316 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 MRPL58Q14197 206 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ANKRD54Q6NXT1 300 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 LAPTM4BQ86VI4 370 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 IPMKQ8NFU5 416 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 RELTQ969Z4 430 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ACE2Q9BYF1 805 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 QRSL1Q9H0R6 528 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ANGPT4Q9Y264 503 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 A0A088AWK7 358 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 BTN3A1O00481 513 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 PNPP00491 289 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 JCHAINP01591 159 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ALDH2P05091 517 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 FGF1P05230 155 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 DLDP09622 509 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 PET100P0DJ07 73 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 MBL2P11226 248 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SLC2A4P14672 509 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 GDI1P31150 447 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 CDKN2CP42773 168 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 MAP2K4P45985 399 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 KCNJ5P48544 419 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 TAS2R43P59537 309 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 EIF2S3LQ2VIR3 472 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 PLEKHN1Q494U1 663 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 TPGS2Q68CL5 300 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 NEPROQ6NW34 567 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SLC51BQ86UW2 128 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 BRSK1Q8TDC3 778 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 FCRL2Q96LA5 508 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 PHB2Q99623 299 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 FUNDC2Q9BWH2 189 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 TTLL2Q9BWV7 592 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ARHGAP39Q9C0H5 1083 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 METTL8Q9H825 291 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 NANSQ9NR45 359 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 OSER1Q9NX31 292 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 TAS2R13Q9NYV9 303 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ATXN7L1Q9ULK2 861 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SAMHD1Q9Y3Z3 626 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 DRGXA6NNA5 263 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 STX16O14662 325 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SLC9A3R1O14745 358 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ZBTB24O43167 697 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SLC7A4O43246 635 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 S100A3P33764 101 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 GNPDA1P46926 289 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 PTSQ03393 145 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 PRKCDQ05655 676 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 EIF4HQ15056 248 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SLC39A12Q504Y0 691 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 RAB6CQ53S08 254 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 PIGGQ5H8A4 983 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 VARS2Q5ST30 1063 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 LRIF1Q5T3J3 769 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 MEDAGQ5VYS4 303 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 RNF219Q5W0B1 726 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 GRHL2Q6ISB3 625 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 CD300LGQ6UXG3 332 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 HSDL2Q6YN16 418 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 GCNT7Q6ZNI0 430 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 CHST9Q7L1S5 443 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ZNF655Q8N720 491 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 OR52K1Q8NGK4 314 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 FBXO32Q969P5 355 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 MARVELD3Q96A59 401 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SLC6A16Q9GZN6 736 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 NAA50Q9GZZ1 169 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 RAB6CQ9H0N0 254 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 RANGRFQ9HD47 186 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SNX15Q9NRS6 342 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 GMEB2Q9UKD1 530 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 ISM1B1AKI9 464 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 QSOX1O00391 747 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 RP2O75695 350 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SCGNO76038 276 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 CYBBP04839 570 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 PRKCGP05129 697 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 PFKLP17858 780 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 PBX3P40426 434 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 SLC11A2P49281 568 aa5.87□□□□□ -1.47
PTPRD-214ENST00000540109 RPS3AP61247 264 aaKnown RBP5.87□□□□□ -1.47
PTPRD-214ENST00000540109 NR6A1Q15406 480 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms