RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 WDR75Q8IWA0 830 aaKnown RBP22.41■■□□□ 1.18
TMEM260-202ENST00000538838 KCT2Q8NC54 265 aa22.41■■□□□ 1.18
TMEM260-202ENST00000538838 CAMKVQ8NCB2 501 aa22.41■■□□□ 1.18
TMEM260-202ENST00000538838 NT5CQ8TCD5 201 aa22.41■■□□□ 1.18
TMEM260-202ENST00000538838 C19orf60Q96EN9 201 aa22.41■■□□□ 1.18
TMEM260-202ENST00000538838 OR51B5Q9H339 312 aa22.41■■□□□ 1.18
TMEM260-202ENST00000538838 APMAPQ9HDC9 416 aa22.41■■□□□ 1.18
TMEM260-202ENST00000538838 RUVBL1Q9Y265 456 aaKnown RBP22.41■■□□□ 1.18
TMEM260-202ENST00000538838 USH1CQ9Y6N9 552 aa22.41■■□□□ 1.18
TMEM260-202ENST00000538838 HDAC3O15379 428 aa22.4■■□□□ 1.18
TMEM260-202ENST00000538838 OR2B3O76000 313 aa22.4■■□□□ 1.18
TMEM260-202ENST00000538838 ITIH1P19827 911 aa22.4■■□□□ 1.18
TMEM260-202ENST00000538838 ITGA1P56199 1179 aa22.4■■□□□ 1.18
TMEM260-202ENST00000538838 SNRPNP63162 240 aaKnown RBP22.4■■□□□ 1.18
TMEM260-202ENST00000538838 CSTF3Q12996 717 aaKnown RBP22.4■■□□□ 1.18
TMEM260-202ENST00000538838 TARDBPQ13148 414 aaKnown RBP eCLIP22.4■■□□□ 1.18
TMEM260-202ENST00000538838 PWP1Q13610 501 aa22.4■■□□□ 1.18
TMEM260-202ENST00000538838 TOR1AIP1Q5JTV8 583 aa22.4■■□□□ 1.18
TMEM260-202ENST00000538838 CGB2Q6NT52 195 aa22.4■■□□□ 1.18
TMEM260-202ENST00000538838 OR2T11Q8NH01 316 aa22.4■■□□□ 1.18
TMEM260-202ENST00000538838 C3orf30Q96M34 536 aa22.4■■□□□ 1.18
TMEM260-202ENST00000538838 SLC6A16Q9GZN6 736 aa22.4■■□□□ 1.18
TMEM260-202ENST00000538838 BRF2Q9HAW0 419 aa22.4■■□□□ 1.18
TMEM260-202ENST00000538838 SLC12A4Q9UP95 1085 aa22.4■■□□□ 1.18
TMEM260-202ENST00000538838 CCDC187A0A096LP49 1063 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 A0A1W2PNU3 283 aaPredicted RBP22.39■■□□□ 1.18
TMEM260-202ENST00000538838 SLCO1B7G3V0H7 640 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 SERPINA6P08185 405 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 HK2P52789 917 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 ZNF33BQ06732 778 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 RGS1Q08116 209 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 PRTGQ2VWP7 1150 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 XKR7Q5GH72 579 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 TCTE1Q5JU00 501 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 VWA5B1Q5TIE3 1220 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 RNF165Q6ZSG1 346 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 TRIM46Q7Z4K8 759 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 ZNF655Q8N720 491 aaPredicted RBP22.39■■□□□ 1.18
TMEM260-202ENST00000538838 ZCCHC10Q8TBK6 192 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 CMTM7Q96FZ5 175 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 F2RL3Q96RI0 385 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 CTRCQ99895 268 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 NLNQ9BYT8 704 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 KLHL31Q9H511 634 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 NPHS2Q9NP85 383 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 VTI1BQ9UEU0 232 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 RARRES3Q9UL19 164 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 PPT2Q9UMR5 302 aa22.39■■□□□ 1.18
TMEM260-202ENST00000538838 MRPS2Q9Y399 296 aaKnown RBP22.39■■□□□ 1.18
TMEM260-202ENST00000538838 SERTM1A2A2V5 107 aa22.39■■□□□ 1.17
TMEM260-202ENST00000538838 C4orf51C9J302 202 aa22.39■■□□□ 1.17
TMEM260-202ENST00000538838 SAP18O00422 153 aaKnown RBP22.39■■□□□ 1.17
TMEM260-202ENST00000538838 ZNF195O14628 629 aa22.39■■□□□ 1.17
TMEM260-202ENST00000538838 HSD3B1P14060 373 aa22.39■■□□□ 1.17
TMEM260-202ENST00000538838 HSD3B2P26439 372 aa22.39■■□□□ 1.17
TMEM260-202ENST00000538838 ETV5P41161 510 aa22.39■■□□□ 1.17
TMEM260-202ENST00000538838 IMPG1Q17R60 797 aa22.39■■□□□ 1.17
TMEM260-202ENST00000538838 PRAMEF17Q5VTA0 474 aa22.39■■□□□ 1.17
TMEM260-202ENST00000538838 KHDRBS2Q5VWX1 349 aaKnown RBP22.39■■□□□ 1.17
TMEM260-202ENST00000538838 GBP7Q8N8V2 638 aaPredicted RBP22.39■■□□□ 1.17
TMEM260-202ENST00000538838 RNF31Q96EP0 1072 aa22.39■■□□□ 1.17
TMEM260-202ENST00000538838 SERTAD3Q9UJW9 196 aa22.39■■□□□ 1.17
TMEM260-202ENST00000538838 CCL27Q9Y4X3 112 aa22.39■■□□□ 1.17
TMEM260-202ENST00000538838 DCHS1Q96JQ0 3298 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 ATP6AP2A0A1C7CYW4 349 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 LRIT2A6NDA9 550 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 ATP6AP2O75787 350 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 MC2RQ01718 297 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 SF3A3Q12874 501 aaKnown RBP eCLIP22.38■■□□□ 1.17
TMEM260-202ENST00000538838 ADPRMQ3LIE5 342 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 C3orf38Q5JPI3 329 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 FOXR1Q6PIV2 292 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 HOMEZQ8IX15 550 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 GPR135Q8IZ08 494 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 CACTIN-AS1Q8N1I8 211 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 GALNT15Q8N3T1 639 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 RFWD2Q8NHY2 731 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 PMEPA1Q969W9 287 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 SERPINI1Q99574 410 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 REXO4Q9GZR2 422 aaKnown RBP22.38■■□□□ 1.17
TMEM260-202ENST00000538838 MEAF6Q9HAF1 191 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 GIMAP2Q9UG22 337 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 PISDQ9UG56 409 aa22.38■■□□□ 1.17
TMEM260-202ENST00000538838 SCN3AQ9NY46 2000 aa22.37■■□□□ 1.17
TMEM260-202ENST00000538838 GMNCA6NCL1 334 aa22.37■■□□□ 1.17
TMEM260-202ENST00000538838 B4E171 279 aa22.37■■□□□ 1.17
TMEM260-202ENST00000538838 SLC28A1O00337 649 aa22.37■■□□□ 1.17
TMEM260-202ENST00000538838 ZSCAN9O15535 394 aaPredicted RBP22.37■■□□□ 1.17
TMEM260-202ENST00000538838 SHOX2O60902 331 aaPredicted RBP22.37■■□□□ 1.17
TMEM260-202ENST00000538838 MED26O95402 600 aa22.37■■□□□ 1.17
TMEM260-202ENST00000538838 TIAF1O95411 115 aa22.37■■□□□ 1.17
TMEM260-202ENST00000538838 ALOX15P16050 662 aaPredicted RBP22.37■■□□□ 1.17
TMEM260-202ENST00000538838 PTX3P26022 381 aaPredicted RBP22.37■■□□□ 1.17
TMEM260-202ENST00000538838 TSPAN7P41732 249 aa22.37■■□□□ 1.17
TMEM260-202ENST00000538838 MAPK10P53779 464 aa22.37■■□□□ 1.17
TMEM260-202ENST00000538838 STXBP1P61764 594 aaKnown RBP22.37■■□□□ 1.17
TMEM260-202ENST00000538838 DEPDC1Q5TB30 811 aa22.37■■□□□ 1.17
TMEM260-202ENST00000538838 TMEM214Q6NUQ4 689 aaKnown RBP22.37■■□□□ 1.17
TMEM260-202ENST00000538838 Q6ZSR9 355 aa22.37■■□□□ 1.17
TMEM260-202ENST00000538838 ARHGEF39Q8N4T4 335 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms