RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 HCRTR1O43613 425 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 PEX11AO75192 247 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 ATP5HO75947 161 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 PDYNP01213 254 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.23
CLN6-202ENST00000538696 CASP2P42575 452 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 SLBPQ14493 270 aaKnown RBP eCLIP16.46■□□□□ 0.23
CLN6-202ENST00000538696 DEFB110Q30KQ9 67 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 LIPJQ5W064 366 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 GRHL2Q6ISB3 625 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 TMPRSS12Q86WS5 348 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 DNAJC22Q8N4W6 341 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 ZNF740Q8NDX6 193 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 SELENOMQ8WWX9 145 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 SLC7A6OSQ96CW6 309 aaPredicted RBP16.46■□□□□ 0.23
CLN6-202ENST00000538696 MTFMTQ96DP5 389 aaKnown RBP16.46■□□□□ 0.23
CLN6-202ENST00000538696 FCRL4Q96PJ5 515 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 CCT7Q99832 543 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 TUBB6Q9BUF5 446 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 PDE7BQ9NP56 450 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 SIDT1Q9NXL6 827 aaKnown RBP16.46■□□□□ 0.23
CLN6-202ENST00000538696 PILRAQ9UKJ1 303 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 SNX6Q9UNH7 406 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 CFAP54Q96N23 3096 aa16.46■□□□□ 0.23
CLN6-202ENST00000538696 FEZF1A0PJY2 475 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 TMX2-CTNND1H3BSU7 103 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 SLC28A1O00337 649 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 HYAL3O43820 417 aaPredicted RBP16.45■□□□□ 0.22
CLN6-202ENST00000538696 ULK1O75385 1050 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 ESRRAP11474 423 aaPredicted RBP16.45■□□□□ 0.22
CLN6-202ENST00000538696 CALB2P22676 271 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 PRDX6P30041 224 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 BCL6P41182 706 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 ARL4DP49703 201 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 ATP4BP51164 291 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 NEK2P51955 445 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 HMGCS1Q01581 520 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 ACTN3Q08043 901 aaPredicted RBP16.45■□□□□ 0.22
CLN6-202ENST00000538696 CYP4F3Q08477 520 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 NR6A1Q15406 480 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 OGFOD2Q6N063 350 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 FBXO42Q6P3S6 717 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 CACTIN-AS1Q8N1I8 211 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 LIN37Q96GY3 246 aaPredicted RBP16.45■□□□□ 0.22
CLN6-202ENST00000538696 AIF1LQ9BQI0 150 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 EFCAB11Q9BUY7 163 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 STRADBQ9C0K7 418 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 ELOVL6Q9H5J4 265 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 OCIAD1Q9NX40 245 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 SPTBP11277 2137 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 SPEGQ15772 3267 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 A0A0J9YVX5 310 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 TRBC2A0A5B9 178 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 FAM149AA5PLN7 773 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 LSM1O15116 133 aaKnown RBP16.45■□□□□ 0.22
CLN6-202ENST00000538696 SLC22A2O15244 555 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 DNAJC8O75937 253 aaPredicted RBP16.45■□□□□ 0.22
CLN6-202ENST00000538696 COX4I1P13073 169 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 EZRP15311 586 aaKnown RBP16.45■□□□□ 0.22
CLN6-202ENST00000538696 FOLR1P15328 257 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 CSTF2P33240 577 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLN6-202ENST00000538696 HNF4AP41235 474 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 RELAQ04206 551 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 GPR19Q15760 415 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 ATP6AP1LQ52LC2 224 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 C6orf136Q5SQH8 315 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 FRG2Q64ET8 278 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 RINLQ6ZS11 566 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 TMPRSS7Q7RTY8 843 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 TRIM46Q7Z4K8 759 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 SPATA19Q7Z5L4 167 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 MARCH9Q86YJ5 346 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 KIF2BQ8N4N8 673 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 AGBL5Q8NDL9 886 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 FRG2BQ96QU4 278 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 ZFYVE21Q9BQ24 234 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 C1orf50Q9BV19 199 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 SARGQ9BW04 601 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 ACPTQ9BZG2 426 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 LOXL2Q9Y4K0 774 aa16.45■□□□□ 0.22
CLN6-202ENST00000538696 A0A1W2PNU3 283 aaPredicted RBP16.44■□□□□ 0.22
CLN6-202ENST00000538696 PMS2P1A4D2B8 440 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 EFCAB7A8K855 629 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 RGS14O43566 566 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 LCMT2O60294 686 aaKnown RBP16.44■□□□□ 0.22
CLN6-202ENST00000538696 CTSBP07858 339 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 ADSLP30566 484 aaPredicted RBP16.44■□□□□ 0.22
CLN6-202ENST00000538696 GRK3P35626 688 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 CORO7P57737 925 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 ERVK-8P63133 956 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 TARDBPQ13148 414 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLN6-202ENST00000538696 LAPTM5Q13571 262 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 HERC3Q15034 1050 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 IMPG1Q17R60 797 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 ZC3H12BQ5HYM0 836 aaKnown RBP16.44■□□□□ 0.22
CLN6-202ENST00000538696 PAGE2BQ5JRK9 111 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 TMTC4Q5T4D3 741 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 FRMPD2BQ6IN97 320 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 ADNP2Q6IQ32 1131 aa16.44■□□□□ 0.22
CLN6-202ENST00000538696 GK5Q6ZS86 529 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms