RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 PRAMEF26H0Y7S4 382 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 BLOC1S5-TXNDC5H3BN57 136 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 AGPSO00116 658 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 DNAJA2O60884 412 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 LILRB3O75022 631 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 PDYNP01213 254 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 GABRA3P34903 492 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 SRYQ05066 204 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 NIPAL4Q0D2K0 466 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 TMEM31Q5JXX7 168 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 TANGO2Q6ICL3 276 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 ATG14Q6ZNE5 492 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 SPATC1Q76KD6 591 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 ZBTB46Q86UZ6 589 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 RNF130Q86XS8 419 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 KLHDC9Q8NEP7 349 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 SHKBP1Q8TBC3 707 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 FATE1Q969F0 183 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 KIAA1191Q96A73 305 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 CLCC1Q96S66 551 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 PLCL2Q9UPR0 1127 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 SPIN1Q9Y657 262 aaPredicted RBP5.18□□□□□ -1.58
LRP6-203ENST00000538239 VSTM5A8MXK1 200 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 PGRMC2O15173 223 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 CER1O95813 267 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 LYNP07948 512 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 MPC1LP0DKB6 136 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 THRBP10828 461 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 MNDAP41218 407 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 CAPZA1P52907 286 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 CLRN1P58418 232 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 RPS15AP62244 130 aaKnown RBP5.18□□□□□ -1.58
LRP6-203ENST00000538239 ARSJQ5FYB0 599 aaPredicted RBP5.18□□□□□ -1.58
LRP6-203ENST00000538239 CARD17Q5XLA6 110 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 RNF111Q6ZNA4 994 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 FAM43BQ6ZT52 329 aaPredicted RBP5.18□□□□□ -1.58
LRP6-203ENST00000538239 UBQLNLQ8IYU4 475 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 EID2Q8N6I1 236 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 NPWQ8N729 165 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 RASGEF1AQ8N9B8 481 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 EPYCQ99645 322 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 THUMPD1Q9NXG2 353 aaKnown RBP5.18□□□□□ -1.58
LRP6-203ENST00000538239 MOCS1Q9NZB8 636 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 CA5BQ9Y2D0 317 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 A0A1W2PPL8 197 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 HYKKA2RU49 373 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 G6PDP11413 515 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 ZNF20P17024 532 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 ZNF3P17036 446 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 ATF6P18850 670 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 PRDX6P30041 224 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 STAT5AP42229 794 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 MTTPP55157 894 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 DLG1Q12959 904 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 FGL2Q14314 439 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 FLYWCH1Q4VC44 716 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 NIPAL1Q6NVV3 410 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 AHSA2Q719I0 299 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 HMGN2P46Q86SG4 172 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 RFKQ969G6 155 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 PNPLA2Q96AD5 504 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 KCNC2Q96PR1 638 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 ZNF347Q96SE7 839 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 RNF38Q9H0F5 515 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 LINC01553A4QN01 128 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 CYP17A1P05093 508 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 C1GALT1C1LP0DN25 315 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 XKP51811 444 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 PGGT1BP53609 377 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 POU6F2P78424 691 aaPredicted RBP5.18□□□□□ -1.58
LRP6-203ENST00000538239 SCRN3Q0VDG4 424 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 RIPK1Q13546 671 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 CDKN3Q16667 212 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 ZNF678Q5SXM1 525 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 EGFLAMQ63HQ2 1017 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 MZT2BQ6NZ67 158 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 KBTBD2Q8IY47 623 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 IQCKQ8N0W5 287 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 PQLC1Q8N2U9 271 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 SFRP1Q8N474 314 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 OR4K1Q8NGD4 311 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 OR6N1Q8NGY5 312 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 RETREG1Q9H6L5 497 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 PNPLA3Q9NST1 481 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 STARD5Q9NSY2 213 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 TAS2R9Q9NYW1 312 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 PPP4R1LQ9P1A2 415 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.18□□□□□ -1.58
LRP6-203ENST00000538239 C15orf41Q9Y2V0 281 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 TMED5Q9Y3A6 229 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 LTBP4Q8N2S1 1624 aa5.18□□□□□ -1.58
LRP6-203ENST00000538239 PLD2O14939 933 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 PROS1P07225 676 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 CAPGP40121 348 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 SLC26A3P40879 764 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 KCNC1P48547 511 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 DSC1Q08554 894 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 PLCXD2Q0VAA5 305 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 FIGLAQ6QHK4 219 aa5.17□□□□□ -1.58
LRP6-203ENST00000538239 TMEM107Q6UX40 140 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms