RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 C9orf43Q8TAL5 461 aaPredicted RBP10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 ZNF431Q8TF32 576 aaPredicted RBP10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 UFD1Q92890 307 aa10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 RBPMSQ93062 196 aaKnown RBP10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 ZSWIM3Q96MP5 696 aa10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 QRFPRQ96P65 431 aa10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 CNPPD1Q9BV87 410 aa10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 TMEM168Q9H0V1 697 aa10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 ACTL8Q9H568 366 aa10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 HEXA-AS1Q9H8Q6 139 aa10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 RBFOX1Q9NWB1 397 aaKnown RBP10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 MARCH5Q9NX47 278 aa10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 GPR83Q9NYM4 423 aa10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 ZNF490Q9ULM2 529 aaPredicted RBP10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 PCDHB8Q9UN66 801 aa10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 ABCG2Q9UNQ0 655 aa10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 VPS9D1Q9Y2B5 631 aa10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 KLF2Q9Y5W3 355 aaPredicted RBP10.97□□□□□ -0.65
SEMA4D-221ENST00000537934 MIA3Q5JRA6 1907 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 SYNJ2BP-COX16A0A087WUM0 186 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 FABP12A6NFH5 140 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 FAM220BPB1ANY3 271 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 FHP07954 510 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 MAP2K6P52564 334 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 CLDN20P56880 219 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 TPI1P60174 286 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 S100A12P80511 92 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 CAMK2GQ13555 558 aaPredicted RBP10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 KIAA0040Q15053 153 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 ZNF549Q6P9A3 640 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 GHDCQ8N2G8 530 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 LPCAT1Q8NF37 534 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 OR7G3Q8NG95 312 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 PTP4A1Q93096 173 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 KIAA1143Q96AT1 154 aaPredicted RBP10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 ATOH8Q96SQ7 321 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 PKMYT1Q99640 499 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 MGLLQ99685 303 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 RACGAP1Q9H0H5 632 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 COX16Q9P0S2 106 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 IKZF3Q9UKT9 509 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 ING4Q9UNL4 249 aa10.96□□□□□ -0.65
SEMA4D-221ENST00000537934 TMEM189-UBE2V1I3L0A0 370 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 ACSL4O60488 711 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 SLC43A1O75387 559 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 OR4F21O95013 312 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 VIPP01282 170 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 IFNA7P01567 189 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 G6PDP11413 515 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 NCF1P14598 390 aaPredicted RBP10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 ARSBP15848 533 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 ADRA1AP35348 466 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 CCT3P49368 545 aaKnown RBP10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 PITX1P78337 314 aaPredicted RBP10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 ST3GAL4Q11206 333 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 RUNDC3AQ59EK9 446 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 FAM171A1Q5VUB5 890 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 OR4F3Q6IEY1 312 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 MZT2BQ6NZ67 158 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 CFAP77Q6ZQR2 320 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 CILP2Q8IUL8 1156 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 RASGRP3Q8IV61 690 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 SH3RF2Q8TEC5 729 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 BCL7CQ8WUZ0 217 aaPredicted RBP10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 SLC13A3Q8WWT9 602 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 NT5C3BQ969T7 300 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 FAM149B1Q96BN6 582 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 PDXPQ96GD0 296 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 TSGA13Q96PP4 275 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 SORCS2Q96PQ0 1159 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 FCRL5Q96RD9 977 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 GABARAPL3Q9BY60 117 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 TFB2MQ9H5Q4 396 aaKnown RBP10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 CUEDC1Q9NWM3 386 aaPredicted RBP10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 TAS2R7Q9NYW3 318 aa10.96□□□□□ -0.66
SEMA4D-221ENST00000537934 CHD7Q9P2D1 2997 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 FABP7O15540 132 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 SGTAO43765 313 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 RPS17P08708 135 aaKnown RBP10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 ACRP10323 421 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 TYMPP19971 482 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 ZP3P21754 424 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 F8A1P23610 371 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 PRDX3P30048 256 aaKnown RBP10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 BMP8BP34820 402 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 CLCNKAP51800 687 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 PCDH1Q08174 1060 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 FLYWCH1Q4VC44 716 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 INO80DQ53TQ3 878 aaPredicted RBP10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 ATG9BQ674R7 924 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 CNKSR3Q6P9H4 555 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 KLHL17Q6TDP4 642 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 Q6ZSR9 355 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 HFE2Q6ZVN8 426 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 BMP8AQ7Z5Y6 402 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 GALNT10Q86SR1 603 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 CALHM3Q86XJ0 350 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 MSRB3Q8IXL7 192 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 THEM5Q8N1Q8 247 aa10.95□□□□□ -0.66
SEMA4D-221ENST00000537934 OR10Q1Q8NGQ4 319 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms