RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 FSTL5Q8N475 847 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 NAT8LQ8N9F0 302 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CAMK1GQ96NX5 476 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SECISBP2Q96T21 854 aaKnown RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 TMEM39BQ9GZU3 492 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 PLEKHA1Q9HB21 404 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 HCN4Q9Y3Q4 1203 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 NME7Q9Y5B8 376 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 HEMK1Q9Y5R4 338 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ARFGEF1Q9Y6D6 1849 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 A0A1W2PQ09 198 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 MT-ND5P03915 603 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 THP07101 528 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 RETP07949 1114 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 RD3LP0DJH9 198 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SLC5A2P31639 672 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CA5AP35218 305 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SMSP52788 366 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 UFM1P61960 85 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 FXNQ16595 210 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SPIN3Q5JUX0 258 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 PRPF38BQ5VTL8 546 aaKnown RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 RD3Q7Z3Z2 195 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ZUFSPQ96AP4 578 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 STUB1Q9UNE7 303 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 COPS3Q9UNS2 423 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 WDR45Q9Y484 360 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 FOCADQ5VW36 1801 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 A0A0A6YYH2 397 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 A6NJ64 397 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CASC3O15234 703 aaKnown RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SREBF2Q12772 1141 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CTXN3Q4LDR2 81 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 RABL3Q5HYI8 236 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ATG4CQ96DT6 458 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 PRDM9Q9NQV7 894 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 TEX10Q9NXF1 929 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CPA4Q9UI42 421 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SLC27A6Q9Y2P4 619 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 TEX13DA0A0J9YY54 714 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 HMX3A6NHT5 357 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 DLX3O60479 287 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 KERAO60938 352 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ECI2O75521 394 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ANXA8P13928 327 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 FOXM1Q08050 763 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 LARS2Q15031 903 aaKnown RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SLC22A10Q63ZE4 541 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 WSCD1Q658N2 575 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF283Q8N7M2 679 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 PGLYRP2Q96PD5 576 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 C12orf57Q99622 126 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CRB3Q9BUF7 120 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SLC5A7Q9GZV3 580 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ERVMER34-1Q9H9K5 563 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 PRKAG2Q9UGJ0 569 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ZDHHC2Q9UIJ5 367 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CCDC85CA6NKD9 419 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ELOA3DA6NLF2 546 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 GPR89AB7ZAQ6 455 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 KRBOX1C9JBD0 128 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 DNAJB5O75953 348 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CH25HO95992 272 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ANXA4P09525 319 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 GPR89BP0CG08 455 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 PTPN3P26045 913 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 MAPK3P27361 379 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 C2orf76Q3KRA6 126 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ELOA3BQ3SY89 546 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CAPN13Q6MZZ7 669 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 NLRP8Q86W28 1048 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 NLGN1Q8N2Q7 840 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ARL14Q8N4G2 192 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ELOA3Q8NG57 546 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SCGB3A2Q96PL1 93 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 OR14A2Q96R54 314 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 C19orf12Q9NSK7 152 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF358Q9NW07 568 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 LMTK3Q96Q04 1460 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 H7C4K7 107 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 FHP07954 510 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ALAS2P22557 587 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SERPINA4P29622 427 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 HSPB3Q12988 150 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SCARB2Q14108 478 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 MFSD14CQ5VZR4 134 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 MBLAC2Q68D91 279 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SLC51AQ86UW1 340 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 APOBEC3FQ8IUX4 373 aaKnown RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 PELOQ9BRX2 385 aaKnown RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CIPCQ9C0C6 399 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 IL17RBQ9NRM6 502 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 A0A1W2PQL4 384 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 FGBP02675 491 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ZDHHC11BP0C7U3 371 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 EPHB3P54753 998 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 PRR5P85299 388 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 IQCHQ86VS3 1027 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 DNAJB3Q8WWF6 145 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 RERGQ96A58 199 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms