RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 SPIN4Q56A73 249 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 TRIM74Q86UV6 250 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 TRIM73Q86UV7 250 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 OR56A3Q8NH54 315 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 TIFAQ96CG3 184 aa13.79□□□□□ -0.2
USP44-203ENST00000537435 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.79□□□□□ -0.2
USP44-203ENST00000537435 PNMA8BQ9ULN7 279 aaPredicted RBP13.79□□□□□ -0.2
USP44-203ENST00000537435 LILRB3O75022 631 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 ATP6V1G1O75348 118 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 C8AP07357 584 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 PBLDP30039 288 aaPredicted RBP13.78□□□□□ -0.2
USP44-203ENST00000537435 CRATP43155 626 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 SELENOWP63302 87 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 DEFB103AP81534 67 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 FPGSQ05932 587 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 FADDQ13158 208 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 TEAD4Q15561 434 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 ZNF284Q2VY69 593 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 ARSIQ5FYB1 569 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 COX20Q5RI15 118 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 ZNF852Q6ZMS4 543 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 TMPRSS11BQ86T26 416 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 PLD3Q8IV08 490 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 OR4K1Q8NGD4 311 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 BTN2A2Q8WVV5 523 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 VWCEQ96DN2 955 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 SAMD11Q96NU1 681 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 FEVQ99581 238 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 HEPHQ9BQS7 1158 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 COPS4Q9BT78 406 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 ZSCAN5AQ9BUG6 496 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 ITPAQ9BY32 194 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 SLIRPQ9GZT3 109 aaKnown RBP13.78□□□□□ -0.2
USP44-203ENST00000537435 GPATCH2Q9NW75 528 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 NDUFAF4Q9P032 175 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 MAPRE3Q9UPY8 281 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 EXO1Q9UQ84 846 aaKnown RBP13.78□□□□□ -0.2
USP44-203ENST00000537435 LYVE1Q9Y5Y7 322 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 MYOFQ9NZM1 2061 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 CLDN24A6NM45 220 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 EFCAB9A8MZ26 197 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 QSOX1O00391 747 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 RNASET2O00584 256 aaKnown RBP13.78□□□□□ -0.2
USP44-203ENST00000537435 NPC1O15118 1278 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 ETFAP13804 333 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 SYT16Q17RD7 645 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 UBE2UQ5VVX9 321 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 ADIPOR2Q86V24 386 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 KLHDC8AQ8IYD2 350 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 NEIL2Q969S2 332 aa13.78□□□□□ -0.2
USP44-203ENST00000537435 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.78□□□□□ -0.2
USP44-203ENST00000537435 SLC5A10A0PJK1 596 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 TTC34A8MYJ7 566 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 ADAMDEC1O15204 470 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 ADAM23O75077 832 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 ATG13O75143 517 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 HLA-EP13747 358 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 TIMP2P16035 220 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 PDHA2P29803 388 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 C21orf33P30042 268 aaPredicted RBP13.77□□□□□ -0.21
USP44-203ENST00000537435 LIPAP38571 399 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 CCR2P41597 374 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 CSNK2BP67870 215 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 PCDH1Q08174 1060 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 PPIGQ13427 754 aaKnown RBP eCLIP13.77□□□□□ -0.21
USP44-203ENST00000537435 POM121L1PQ3SYA9 428 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 TMEM215Q68D42 235 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 MED27Q6P2C8 311 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 OTOP2Q7RTS6 562 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 PAGE2Q7Z2X7 111 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 KLHL23Q8NBE8 558 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 OR10G2Q8NGC3 310 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 CYB5D2Q8WUJ1 264 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 SORCS1Q8WY21 1168 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 PROX1Q92786 737 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 SLC38A4Q969I6 547 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 ZHX1-C8orf76Q96EF9 292 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 EPS8L2Q9H6S3 715 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 RC3H2Q9HBD1 1191 aaKnown RBP13.77□□□□□ -0.21
USP44-203ENST00000537435 AMBNQ9NP70 447 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 KCNE2Q9Y6J6 123 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 AP1M2Q9Y6Q5 423 aa13.77□□□□□ -0.21
USP44-203ENST00000537435 RFPL2O75678 378 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 GBAP04062 536 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 ZNF8P17098 575 aaPredicted RBP13.76□□□□□ -0.21
USP44-203ENST00000537435 GGT2P36268 569 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 OR1E2P47887 323 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 PRLHRP49683 370 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 MVDP53602 400 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 HBA1P69905 142 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 PRSS36Q5K4E3 855 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 SLCO4C1Q6ZQN7 724 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 SLC5A8Q8N695 610 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 OR52J3Q8NH60 311 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 GLYATL1Q969I3 302 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 FAM83CQ9BQN1 747 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 CCM2Q9BSQ5 444 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 MTG2Q9H4K7 406 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 ASAH2Q9NR71 780 aa13.76□□□□□ -0.21
USP44-203ENST00000537435 PSORS1C1Q9UIG5 152 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms