RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ATP6V1B1P15313 513 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 KDELR2P33947 212 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 PCGF2P35227 344 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 HKDC1Q2TB90 917 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 NADK2Q4G0N4 442 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 TMEM259Q4ZIN3 620 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 TMEM214Q6NUQ4 689 aaKnown RBP13.04□□□□□ -0.32
SMG6-203ENST00000536871 FAM83HQ6ZRV2 1179 aaPredicted RBP13.04□□□□□ -0.32
SMG6-203ENST00000536871 CBLL1Q75N03 491 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 CDC26Q8NHZ8 85 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 SH3KBP1Q96B97 665 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 PLA2G2FQ9BZM2 168 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 PREBQ9HCU5 417 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 TM9SF3Q9HD45 589 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 ADPRHL2Q9NX46 363 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 SH3BP4Q9P0V3 963 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 ZFC3H1O60293 1989 aaKnown RBP13.04□□□□□ -0.32
SMG6-203ENST00000536871 C1orf226A1L170 272 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 PLRG1O43660 514 aaKnown RBP13.04□□□□□ -0.32
SMG6-203ENST00000536871 GPR37L1O60883 481 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 E2F6O75461 281 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 KRT75O95678 551 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 DNTTP04053 509 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 HOXC4P09017 264 aaPredicted RBP13.04□□□□□ -0.32
SMG6-203ENST00000536871 CDH2P19022 906 aaPredicted RBP13.04□□□□□ -0.32
SMG6-203ENST00000536871 NTSR1P30989 418 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 PBX2P40425 430 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 MAGEA10P43363 369 aaPredicted RBP13.04□□□□□ -0.32
SMG6-203ENST00000536871 ALDH3B2P48448 385 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 PPP2R2BQ00005 443 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 HYAL1Q12794 435 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 OTUD3Q5T2D3 398 aaPredicted RBP13.04□□□□□ -0.32
SMG6-203ENST00000536871 FAM71E1Q6IPT2 247 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 TRIM40Q6P9F5 258 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 PIWIL3Q7Z3Z3 882 aaKnown RBP13.04□□□□□ -0.32
SMG6-203ENST00000536871 SFTPA1Q8IWL2 248 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 ZNF786Q8N393 782 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 SYNPOQ8N3V7 929 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 RNF175Q8N4F7 328 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 C11orf65Q8NCR3 313 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 GPR156Q8NFN8 814 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 OR5AR1Q8NGP9 310 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 ZFP90Q8TF47 636 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 GABRG3Q99928 467 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 KXD1Q9BQD3 176 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 GABARAPL1Q9H0R8 117 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 MVB12BQ9H7P6 319 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 PTTG2Q9NZH5 202 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 ADAM29Q9UKF5 820 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 ICKQ9UPZ9 632 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 WDR37Q9Y2I8 494 aa13.04□□□□□ -0.32
SMG6-203ENST00000536871 COL4A3Q01955 1670 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 C2orf16Q68DN1 1984 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 A0A1B0GVG6 124 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 IFNA14P01570 189 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 FURINP09958 794 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 KIR2DL1P43626 348 aaPredicted RBP13.03□□□□□ -0.32
SMG6-203ENST00000536871 ARFIP1P53367 373 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 TOP3AQ13472 1001 aaPredicted RBP13.03□□□□□ -0.32
SMG6-203ENST00000536871 IRF4Q15306 451 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 RGNQ15493 299 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 SHQ1Q6PI26 577 aaKnown RBP13.03□□□□□ -0.32
SMG6-203ENST00000536871 ARMCX6Q7L4S7 300 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 ZDHHC21Q8IVQ6 265 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 TP53I13Q8NBR0 393 aaPredicted RBP13.03□□□□□ -0.32
SMG6-203ENST00000536871 OR4A15Q8NGL6 344 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 C16orf78Q8WTQ4 265 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 CHFRQ96EP1 664 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 GRIP2Q9C0E4 1043 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 ZDHHC4Q9NPG8 344 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 FZD4Q9ULV1 537 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 TDRKHQ9Y2W6 561 aaKnown RBP13.03□□□□□ -0.32
SMG6-203ENST00000536871 PCDHGB5Q9Y5G0 923 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 HEBP2Q9Y5Z4 205 aa13.03□□□□□ -0.32
SMG6-203ENST00000536871 A0A1W2PP55 124 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 ZNF701M0R085 212 aaPredicted RBP13.02□□□□□ -0.32
SMG6-203ENST00000536871 SNAP29O95721 258 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 TGFB1P01137 390 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 MT-ND1P03886 318 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 FABP3P05413 133 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 GALK1P51570 392 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 TRA2BP62995 288 aaKnown RBP13.02□□□□□ -0.32
SMG6-203ENST00000536871 REEP5Q00765 189 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 C2orf80Q0P641 193 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 ADAM15Q13444 863 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 PYCR3Q53H96 274 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 RBM48Q5RL73 367 aaKnown RBP13.02□□□□□ -0.32
SMG6-203ENST00000536871 DEPDC1Q5TB30 811 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 OR2T5Q6IEZ7 315 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 B3GNT6Q6ZMB0 384 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 SLC9B2Q86UD5 537 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 CLECL1Q8IZS7 167 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 C8orf59Q8N0T1 100 aaPredicted RBP13.02□□□□□ -0.32
SMG6-203ENST00000536871 TBC1D19Q8N5T2 526 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 FAM86B1Q8N7N1 296 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 OR4K1Q8NGD4 311 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 OR52N2Q8NGI0 321 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 OR2T29Q8NH02 315 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 ING2Q9H160 280 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 TMEM38AQ9H6F2 299 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms