RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SLC13A3Q8WWT9 602 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 GTF2H4Q92759 462 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 PYCR2Q96C36 320 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 HSPBAP1Q96EW2 488 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 PPM1MQ96MI6 270 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 TIMM29Q9BSF4 260 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 SLC29A3Q9BZD2 475 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 LIN28AQ9H9Z2 209 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 PARVBQ9HBI1 364 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 TM9SF3Q9HD45 589 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 PRDM8Q9NQV8 689 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 FAIMQ9NVQ4 179 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 WWOXQ9NZC7 414 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 PLAGL1Q9UM63 463 aa12.46□□□□□ -0.41
CDK5RAP3-202ENST00000536708 PRAMEF33A0A0G2JMD5 474 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SPTY2D1-AS1A0A0U1RR47 76 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DEAF1O75398 565 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 KATNA1O75449 491 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 IL6P05231 212 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HNRNPCP07910 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SLC35G4P0C7Q5 338 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SLC2A4P14672 509 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 KELP23276 732 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ITPKAP23677 461 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TPP2P29144 1249 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 GGT5P36269 586 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DGKQP52824 942 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CDH15P55291 814 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 NUP107P57740 925 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ESRRGP62508 458 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SP140Q13342 867 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 FAM98BQ52LJ0 330 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MAMSTRQ6ZN01 415 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 Q6ZNX1 250 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 GPR141Q7Z602 305 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 C1orf216Q8TAB5 229 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 POP5Q969H6 163 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 RNF145Q96MT1 663 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 RDH12Q96NR8 316 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SH3GL1Q99961 368 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 UGT2B28Q9BY64 529 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 RMI1Q9H9A7 625 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 VAPAQ9P0L0 249 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SCHIP1Q9P0W5 487 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TBC1D29Q9UFV1 150 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PCDHGA11Q9Y5H2 935 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ZNF318Q5VUA4 2279 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 A0A1W2PR77 199 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 FAM86C2PA6NEL3 165 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PDZK1P1A8MUH7 402 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 NPIPB8E9PQR5 432 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ULK1O75385 1050 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 C1orf105O95561 183 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HPRP00739 348 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CYP2A7P20853 494 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CD38P28907 300 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ARL1P40616 181 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MTPNP58546 118 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DMPKQ09013 629 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TBPL2Q6SJ96 375 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 RGL4Q8IZJ4 473 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PNPT1Q8TCS8 783 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MAGEE2Q8TD90 523 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CYGBQ8WWM9 190 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 KLHDC7BQ96G42 594 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CNDP2Q96KP4 475 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SEPHS2Q99611 448 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DPY30Q9C005 99 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ATG10Q9H0Y0 220 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DPEP2Q9H4A9 486 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CLMPQ9H6B4 373 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ASF1AQ9Y294 204 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ANGPTL3Q9Y5C1 460 aa12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HEMK1Q9Y5R4 338 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CABIN1Q9Y6J0 2220 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CUL9Q8IWT3 2517 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 GOLGA4Q13439 2230 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TRBV5-3A0A0A0MS03 114 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MANBAO00462 879 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SLC16A8O95907 504 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CATP04040 527 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 EPB42P16452 691 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HOXB6P17509 224 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 IL1RNP18510 177 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ACTR1BP42025 376 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ALDH3A2P51648 485 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 HNRNPFP52597 415 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ARSFP54793 590 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ACTR1AP61163 376 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 RPL38P63173 70 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CLCA4Q14CN2 919 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 RUNDC3AQ59EK9 446 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PRAMEF14Q5SWL7 426 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CCNYL2Q5T2Q4 361 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CACHD1Q5VU97 1274 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SLC36A4Q6YBV0 504 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 NRROSQ86YC3 692 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SMYD1Q8NB12 490 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DTWD2Q8NBA8 298 aa12.44□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ZNF548Q8NEK5 533 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms