RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 CD244Q9BZW8 370 aa17.08■□□□□ 0.32
CCDC61-201ENST00000536603 ZNF304Q9HCX3 659 aa17.08■□□□□ 0.32
CCDC61-201ENST00000536603 DNAJC11Q9NVH1 559 aa17.08■□□□□ 0.32
CCDC61-201ENST00000536603 PTRH2Q9Y3E5 179 aaKnown RBP17.08■□□□□ 0.32
CCDC61-201ENST00000536603 RELNP78509 3460 aa17.08■□□□□ 0.32
CCDC61-201ENST00000536603 UTP20O75691 2785 aaKnown RBP17.07■□□□□ 0.32
CCDC61-201ENST00000536603 TRBC2A0A5B9 178 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 CCDC189A1A4V9 331 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 CCNT2O60583 730 aaKnown RBP17.07■□□□□ 0.32
CCDC61-201ENST00000536603 MTHFD2P13995 350 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 AGTR2P50052 363 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 PGDP52209 483 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 NDUFA9Q16795 377 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 PRMT9Q6P2P2 845 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 LRIG3Q6UXM1 1119 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 SLCO4C1Q6ZQN7 724 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 COX15Q7KZN9 410 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 APLFQ8IW19 511 aaPredicted RBP17.07■□□□□ 0.32
CCDC61-201ENST00000536603 ARHGEF39Q8N4T4 335 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 GALNT11Q8NCW6 608 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 MZB1Q8WU39 189 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 MTBPQ96DY7 904 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 AIF1LQ9BQI0 150 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 CDC14AQ9UNH5 594 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 MRPS2Q9Y399 296 aaKnown RBP17.07■□□□□ 0.32
CCDC61-201ENST00000536603 ASB1Q9Y576 335 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 CCDC88CQ9P219 2028 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 NBASA2RRP1 2371 aa17.07■□□□□ 0.32
CCDC61-201ENST00000536603 IQANK1A0A1B0GTG1 560 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 TLDC2A0PJX2 215 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 AGPSO00116 658 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 FOXS1O43638 330 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 H2AFYO75367 372 aaKnown RBP17.06■□□□□ 0.32
CCDC61-201ENST00000536603 ALBP02768 609 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 PDGFAP04085 211 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 SERPIND1P05546 499 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 C1GALT1C1LP0DN25 315 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 COL6A2P12110 1019 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 GFAPP14136 432 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 FOLR3P41439 243 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 SCTRP47872 440 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 SNRPNP63162 240 aaKnown RBP17.06■□□□□ 0.32
CCDC61-201ENST00000536603 REEP5Q00765 189 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 IFFO1Q0D2I5 559 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 FAM53BQ14153 422 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 RBBP5Q15291 538 aaKnown RBP17.06■□□□□ 0.32
CCDC61-201ENST00000536603 NKG7Q16617 165 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 PFKFB4Q16877 469 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 ATG9BQ674R7 924 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 TIFABQ6ZNK6 161 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 TMEM151BQ8IW70 566 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 KCT2Q8NC54 265 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 OR2Y1Q8NGV0 311 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 FKBP10Q96AY3 582 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 MOCOSQ96EN8 888 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 MVB12AQ96EY5 273 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 MMABQ96EY8 250 aaPredicted RBP17.06■□□□□ 0.32
CCDC61-201ENST00000536603 SCYL1Q96KG9 808 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 SLC25A23Q9BV35 468 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 TRIM55Q9BYV6 548 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 DRC3Q9H069 523 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 ACSS2Q9NR19 701 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 GPRC5BQ9NZH0 403 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 PSMC3IPQ9P2W1 217 aaPredicted RBP17.06■□□□□ 0.32
CCDC61-201ENST00000536603 CTSFQ9UBX1 484 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 TBK1Q9UHD2 729 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 LRRK2Q5S007 2527 aa17.06■□□□□ 0.32
CCDC61-201ENST00000536603 A0A0A6YYC8 382 aaPredicted RBP17.05■□□□□ 0.32
CCDC61-201ENST00000536603 I3L1I5 382 aaPredicted RBP17.05■□□□□ 0.32
CCDC61-201ENST00000536603 CLGNO14967 610 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 NDUFS4O43181 175 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 RBP1P09455 135 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 SLC35G6P0C7Q6 338 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 FBLP22087 321 aaKnown RBP17.05■□□□□ 0.32
CCDC61-201ENST00000536603 CXCR2P25025 360 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 CCL11P51671 97 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 CHAF1BQ13112 559 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 SLBPQ14493 270 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC61-201ENST00000536603 SSPNQ14714 243 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 RASA2Q15283 850 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 PDK4Q16654 411 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 TSNAXIP1Q2TAA8 658 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 TECRLQ5HYJ1 363 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 TMEM214Q6NUQ4 689 aaKnown RBP17.05■□□□□ 0.32
CCDC61-201ENST00000536603 ANKRD53Q8N9V6 530 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 ZCCHC10Q8TBK6 192 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 ADAMTS17Q8TE56 1095 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 SSC4DQ8WTU2 575 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 THAP4Q8WY91 577 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 YIPF2Q9BWQ6 316 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 ROPN1BQ9BZX4 212 aaPredicted RBP17.05■□□□□ 0.32
CCDC61-201ENST00000536603 SLC26A1Q9H2B4 701 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 ROPN1Q9HAT0 212 aaPredicted RBP17.05■□□□□ 0.32
CCDC61-201ENST00000536603 MAP10Q9P2G4 905 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 CPSF2Q9P2I0 782 aaKnown RBP17.05■□□□□ 0.32
CCDC61-201ENST00000536603 ZFP69BQ9UJL9 534 aa17.05■□□□□ 0.32
CCDC61-201ENST00000536603 ARGFXA6NJG6 315 aa17.04■□□□□ 0.32
CCDC61-201ENST00000536603 PRAMEF4O60810 478 aa17.04■□□□□ 0.32
CCDC61-201ENST00000536603 OTX2P32243 289 aa17.04■□□□□ 0.32
CCDC61-201ENST00000536603 AHRP35869 848 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms