RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 PDYNP01213 254 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 PCNAP12004 261 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 ACPPP15309 386 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 MPSTP25325 297 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 CCR10P46092 362 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 SEPHS1P49903 392 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 ITGA1P56199 1179 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 MAD2L1Q13257 205 aaPredicted RBP15.5■□□□□ 0.07
VAMP1-205ENST00000535927 HES3Q5TGS1 186 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 DHRS13Q6UX07 377 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 FAM20CQ8IXL6 584 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.5■□□□□ 0.07
VAMP1-205ENST00000535927 TTC29Q8NA56 475 aaPredicted RBP15.5■□□□□ 0.07
VAMP1-205ENST00000535927 ZNF740Q8NDX6 193 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 WDR36Q8NI36 951 aaKnown RBP15.5■□□□□ 0.07
VAMP1-205ENST00000535927 MVB12AQ96EY5 273 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 PPP3R2Q96LZ3 170 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 MS4A8Q9BY19 250 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 ASPSCR1Q9BZE9 553 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 SLC6A16Q9GZN6 736 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 EPN3Q9H201 632 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 MEAF6Q9HAF1 191 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 DMRT3Q9NQL9 472 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 ACSS2Q9NR19 701 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 PNPOQ9NVS9 261 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 SIDT1Q9NXL6 827 aaKnown RBP15.5■□□□□ 0.07
VAMP1-205ENST00000535927 SRPK3Q9UPE1 567 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 KLHL20Q9Y2M5 609 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 TMED5Q9Y3A6 229 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 TIMM22Q9Y584 194 aa15.5■□□□□ 0.07
VAMP1-205ENST00000535927 CEP295Q9C0D2 2601 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 ATRXP46100 2492 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 SPAARA0A1B0GVQ0 90 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 LRIT2A6NDA9 550 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 FFAR3O14843 346 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 GPR42O15529 346 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 CSO75390 466 aaKnown RBP15.49■□□□□ 0.07
VAMP1-205ENST00000535927 FGF5P12034 268 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 GSTM5P46439 218 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 PDX1P52945 283 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 FOXA1P55317 472 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 MEF2AQ02078 507 aaPredicted RBP15.49■□□□□ 0.07
VAMP1-205ENST00000535927 HERC3Q15034 1050 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 IMPG1Q17R60 797 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 PRTGQ2VWP7 1150 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.49■□□□□ 0.07
VAMP1-205ENST00000535927 SPIN4Q56A73 249 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 WASHC2DQ5SRD0 308 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 KHDRBS2Q5VWX1 349 aaKnown RBP15.49■□□□□ 0.07
VAMP1-205ENST00000535927 CLEC6AQ6EIG7 209 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 CEACAM20Q6UY09 585 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 ATG14Q6ZNE5 492 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 FAM47EQ6ZV65 393 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 ABHD13Q7L211 337 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 TMPRSS7Q7RTY8 843 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 PAGE2Q7Z2X7 111 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 VN1R4Q7Z5H5 301 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 CPLX4Q7Z7G2 160 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 FAM9CQ8IZT9 166 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 CSNK1A1LQ8N752 337 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 ACTRT2Q8TDY3 377 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 RGMAQ96B86 450 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 ZNF501Q96CX3 271 aaPredicted RBP15.49■□□□□ 0.07
VAMP1-205ENST00000535927 C19orf60Q96EN9 201 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 TBCDQ9BTW9 1192 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 SHCBP1LQ9BZQ2 653 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 SPNS1Q9H2V7 528 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 ZNF395Q9H8N7 513 aaPredicted RBP15.49■□□□□ 0.07
VAMP1-205ENST00000535927 CDC14AQ9UNH5 594 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 PCDHB3Q9Y5E6 796 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 USH1CQ9Y6N9 552 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 SEC16AO15027 2179 aa15.49■□□□□ 0.07
VAMP1-205ENST00000535927 COL27A1Q8IZC6 1860 aaPredicted RBP15.48■□□□□ 0.07
VAMP1-205ENST00000535927 MAGEB17A8MXT2 336 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 POLR1CO15160 346 aaPredicted RBP15.48■□□□□ 0.07
VAMP1-205ENST00000535927 NDUFS4O43181 175 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 OR2B3O76000 313 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 FOLR1P15328 257 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 VSX2P58304 361 aaPredicted RBP15.48■□□□□ 0.07
VAMP1-205ENST00000535927 TUBB3Q13509 450 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 ABRAXAS2Q15018 415 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 MUM1Q2TAK8 710 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 CCDC157Q569K6 752 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 XKR7Q5GH72 579 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 TMEM164Q5U3C3 297 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 METTL21CQ5VZV1 264 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 TRIM40Q6P9F5 258 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 EPGNQ6UW88 154 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 RAB11FIP2Q7L804 512 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 PPP1R3BQ86XI6 285 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 DDIASQ8IXT1 998 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 OR2L5Q8NG80 312 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 CEP70Q8NHQ1 597 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 GAL3ST3Q96A11 431 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 MAELQ96JY0 434 aaKnown RBP15.48■□□□□ 0.07
VAMP1-205ENST00000535927 KCNC2Q96PR1 638 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 TAAR9Q96RI9 348 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 KCNA7Q96RP8 456 aa15.48■□□□□ 0.07
VAMP1-205ENST00000535927 MTERF1Q99551 399 aaKnown RBP15.48■□□□□ 0.07
VAMP1-205ENST00000535927 CCDC28BQ9BUN5 200 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms