RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 TMEM214Q6NUQ4 689 aaKnown RBP11.48□□□□□ -0.57
CHD4-203ENST00000535717 MED27Q6P2C8 311 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 MYLK4Q86YV6 388 aaPredicted RBP11.48□□□□□ -0.57
CHD4-203ENST00000535717 SPACA3Q8IXA5 215 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 LAS2Q8IYD9 372 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 METTL27Q8N6F8 245 aaPredicted RBP11.48□□□□□ -0.57
CHD4-203ENST00000535717 IL22RA1Q8N6P7 574 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 CCNYL1Q8N7R7 359 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 L3MBTL4Q8NA19 623 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 TRPV3Q8NET8 790 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 TTLQ8NG68 377 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 OR7G3Q8NG95 312 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 PROKR1Q8TCW9 393 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 TRPC4APQ8TEL6 797 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 PPP4R1Q8TF05 950 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 CT55Q8WUE5 264 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.48□□□□□ -0.57
CHD4-203ENST00000535717 ATP6V1E2Q96A05 226 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 ARL8AQ96BM9 186 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 DPH2Q9BQC3 489 aaPredicted RBP11.48□□□□□ -0.57
CHD4-203ENST00000535717 NTMT1Q9BV86 223 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 CHST8Q9H2A9 424 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 RHBGQ9H310 441 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 GSTO2Q9H4Y5 243 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 WDR70Q9NW82 654 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 MID2Q9UJV3 735 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 CROTQ9UKG9 612 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 ZMIZ1Q9ULJ6 1067 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 SSUH2Q9Y2M2 353 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 PKD1L2Q7Z442 2459 aa11.48□□□□□ -0.57
CHD4-203ENST00000535717 A0A087WV48 116 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 ANKDD1BA6NHY2 528 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 PRPF4O43172 522 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHD4-203ENST00000535717 FOXS1O43638 330 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 SASH3O75995 380 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 TBX6O95947 436 aaPredicted RBP11.47□□□□□ -0.57
CHD4-203ENST00000535717 OTCP00480 354 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 CAPN1P07384 714 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 SERPINA6P08185 405 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 LIFP15018 202 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 F8A1P23610 371 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 ITPKBP27987 946 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 GSTM2P28161 218 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 ALDH3A1P30838 453 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 ARL1P40616 181 aaPredicted RBP11.47□□□□□ -0.57
CHD4-203ENST00000535717 OR1D4P47884 311 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 MAGOHP61326 146 aaKnown RBP11.47□□□□□ -0.57
CHD4-203ENST00000535717 DCDP81605 110 aaKnown RBP11.47□□□□□ -0.57
CHD4-203ENST00000535717 TLE3Q04726 772 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 RGS1Q08116 209 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 CPSF6Q16630 551 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHD4-203ENST00000535717 AGBL2Q5U5Z8 902 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 LIPMQ5VYY2 423 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 LETMD1Q6P1Q0 360 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 FAM198BQ6UWH4 519 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 PRSS41Q7RTY9 318 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 MILR1Q7Z6M3 343 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 OR4F6Q8NGB9 312 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 ZCCHC10Q8TBK6 192 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 UBE2E3Q969T4 207 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 SEC16BQ96JE7 1060 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 MECRQ9BV79 373 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 SLC6A16Q9GZN6 736 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 AICDAQ9GZX7 198 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 DRC3Q9H069 523 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 KLHL31Q9H511 634 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 KCNK9Q9NPC2 374 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 SLC22A11Q9NSA0 550 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 ZNF225Q9UK10 706 aa11.47□□□□□ -0.57
CHD4-203ENST00000535717 A0A0A6YYC8 382 aaPredicted RBP11.46□□□□□ -0.57
CHD4-203ENST00000535717 LRIT2A6NDA9 550 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 SRRM3A6NNA2 597 aaPredicted RBP11.46□□□□□ -0.57
CHD4-203ENST00000535717 H0YIV9 168 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 I3L1I5 382 aaPredicted RBP11.46□□□□□ -0.57
CHD4-203ENST00000535717 UBFD1O14562 309 aaKnown RBP11.46□□□□□ -0.57
CHD4-203ENST00000535717 TM9SF1O15321 606 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 EFSO43281 561 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 ATP8B1O43520 1251 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 TRIM13O60858 407 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 CLEC3AO75596 197 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 MLYCDO95822 493 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 ONECUT2O95948 504 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 BPGMP07738 259 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 ZNF888P0CJ79 500 aaPredicted RBP11.46□□□□□ -0.57
CHD4-203ENST00000535717 PCNAP12004 261 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 WT1P19544 449 aaPredicted RBP11.46□□□□□ -0.57
CHD4-203ENST00000535717 TCN2P20062 427 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 AGXTP21549 392 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 HNRNPH1P31943 449 aaKnown RBP11.46□□□□□ -0.57
CHD4-203ENST00000535717 DLSTP36957 453 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 CCR10P46092 362 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 LCP2Q13094 533 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 DNASE1L3Q13609 305 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 FAM53BQ14153 422 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 SLC9A5Q14940 896 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 ZRSR2Q15696 482 aaKnown RBP11.46□□□□□ -0.57
CHD4-203ENST00000535717 NDUFA9Q16795 377 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 TOR1AIP1Q5JTV8 583 aa11.46□□□□□ -0.57
CHD4-203ENST00000535717 CFAP157Q5JU67 520 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms