RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CNBD2Q96M20 576 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 OR2A14Q96R47 310 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 PRPF18Q99633 342 aaKnown RBP11.81□□□□□ -0.52
SCARB1-204ENST00000535005 PNPLA3Q9NST1 481 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 PNPOQ9NVS9 261 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 RHBDL2Q9NX52 303 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 ACTR10Q9NZ32 417 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 FTSJ1Q9UET6 329 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 ANGPTL3Q9Y5C1 460 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 KCNE2Q9Y6J6 123 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 TRIM64CA6NLI5 447 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 CCNDBP1O95273 360 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 H6PDO95479 791 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 MLYCDO95822 493 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 GP1BAP07359 652 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 TYRP1P17643 537 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 POLR2CP19387 275 aaPredicted RBP11.81□□□□□ -0.52
SCARB1-204ENST00000535005 PIK3R1P27986 724 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 CD1CP29017 333 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 ALDH4A1P30038 563 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 TTKP33981 857 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 CASP2P42575 452 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 CDH13P55290 713 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 LCP2Q13094 533 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 SLC5A12Q1EHB4 618 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 KCTD21Q4G0X4 260 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 PERM1Q5SV97 790 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 ARMC6Q6NXE6 501 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 PATL1Q86TB9 770 aaKnown RBP11.81□□□□□ -0.52
SCARB1-204ENST00000535005 LSMEM2Q8N112 164 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 CEP70Q8NHQ1 597 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 IFI44Q8TCB0 444 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 MOCOSQ96EN8 888 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 WDR34Q96EX3 536 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 NSUN5Q96P11 429 aaKnown RBP11.81□□□□□ -0.52
SCARB1-204ENST00000535005 NTMT1Q9BV86 223 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 IPPKQ9H8X2 491 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 TCF7L2Q9NQB0 619 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 TAC3Q9UHF0 121 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 POMT2Q9UKY4 750 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 G3BP2Q9UN86 482 aaKnown RBP11.81□□□□□ -0.52
SCARB1-204ENST00000535005 FAF1Q9UNN5 650 aaPredicted RBP11.81□□□□□ -0.52
SCARB1-204ENST00000535005 DYRK1BQ9Y463 629 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 KLK4Q9Y5K2 254 aa11.81□□□□□ -0.52
SCARB1-204ENST00000535005 DNAH14Q0VDD8 3507 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 ISM1B1AKI9 464 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 OR7A17O14581 309 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 DUX1O43812 170 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 ATP6V1G1O75348 118 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 HSPA4LO95757 839 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 UGT2B7P16662 529 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 HRH2P25021 359 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 ERFP50548 548 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 NUDT2P50583 147 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 PKNOX1P55347 436 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 SLCO4C1Q6ZQN7 724 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 C17orf64Q86WR6 236 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 DSELQ8IZU8 1212 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 SNX31Q8N9S9 440 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 ABHD11Q8NFV4 315 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 OR2L3Q8NG85 312 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 ITPKCQ96DU7 683 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 ZNF382Q96SR6 550 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 CD180Q99467 661 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 CCT7Q99832 543 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 DPYSL5Q9BPU6 564 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 CCDC3Q9BQI4 270 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 EHD1Q9H4M9 534 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 NOL11Q9H8H0 719 aaKnown RBP11.8□□□□□ -0.52
SCARB1-204ENST00000535005 PALMDQ9NP74 551 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 C8orf4Q9NR00 106 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 ACSS2Q9NR19 701 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 DDX18Q9NVP1 670 aaKnown RBP11.8□□□□□ -0.52
SCARB1-204ENST00000535005 SUCOQ9UBS9 1254 aaKnown RBP11.8□□□□□ -0.52
SCARB1-204ENST00000535005 MYRFQ9Y2G1 1151 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 ASXL3Q9C0F0 2248 aa11.8□□□□□ -0.52
SCARB1-204ENST00000535005 TNFSF14O43557 240 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 UGDHO60701 494 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 OTCP00480 354 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ATP6V1B1P15313 513 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ZNF12P17014 697 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 PRDX3P30048 256 aaKnown RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 CMPK1P30085 196 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ARRB2P32121 409 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ESRRGP62508 458 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 TRAF3Q13114 568 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 CBX3Q13185 183 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ILKQ13418 452 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 TSTA3Q13630 321 aaPredicted RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 SF1Q15637 639 aaKnown RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 PDCD4Q53EL6 469 aaKnown RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 ARL13AQ5H913 290 aaPredicted RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 WDR74Q6RFH5 385 aaPredicted RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 SPESP1Q6UW49 350 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 RPS27LQ71UM5 84 aaKnown RBP11.79□□□□□ -0.52
SCARB1-204ENST00000535005 GLRX5Q86SX6 157 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 CARM1Q86X55 608 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 CARFQ8N187 725 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 PACRGLQ8N7B6 248 aa11.79□□□□□ -0.52
SCARB1-204ENST00000535005 TRIML2Q8N7C3 387 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms