RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CRB2Q5IJ48 1285 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 ADAMTSL2Q86TH1 951 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 PDSS2Q86YH6 399 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 CATSPER1Q8NEC5 780 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 ABHD11Q8NFV4 315 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 OR5T3Q8NGG3 340 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 ANKRD49Q8WVL7 239 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 EXT2Q93063 718 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 TM4SF19Q96DZ7 209 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 TSPAN17Q96FV3 270 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 AIF1LQ9BQI0 150 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 VN1R1Q9GZP7 353 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 RAB17Q9H0T7 212 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 LRRC4CQ9HCJ2 640 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 PRM3Q9NNZ6 103 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 GRHL1Q9NZI5 618 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 C19orf25Q9UFG5 118 aaPredicted RBP9.87□□□□□ -0.83
CAPN1-225ENST00000533704 SLC22A14Q9Y267 594 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 NTNG1Q9Y2I2 539 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 TCRBV9S1A1TA0A576 114 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 DYTNA2CJ06 578 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 CLEC18AA5D8T8 446 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 CYSRT1A8MQ03 144 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 A8MUI8 341 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 EIF3HO15372 352 aaKnown RBP eCLIP9.86□□□□□ -0.83
CAPN1-225ENST00000533704 SEMA7AO75326 666 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 UTP20O75691 2785 aaKnown RBP9.86□□□□□ -0.83
CAPN1-225ENST00000533704 ZNF888P0CJ79 500 aaPredicted RBP9.86□□□□□ -0.83
CAPN1-225ENST00000533704 CCDC166P0CW27 439 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 ITGAMP11215 1152 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 GDF5P43026 501 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 SCTRP47872 440 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 RAB8AP61006 207 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 REEP5Q00765 189 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 POU4F1Q01851 419 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 ACTN3Q08043 901 aaPredicted RBP9.86□□□□□ -0.83
CAPN1-225ENST00000533704 HERC3Q15034 1050 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 TLR1Q15399 786 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 TRADDQ15628 312 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 BTBD16Q32M84 506 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 DEFB134Q4QY38 66 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 TOR1AIP1Q5JTV8 583 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 B3GNTL1Q67FW5 361 aaPredicted RBP9.86□□□□□ -0.83
CAPN1-225ENST00000533704 TMEM205Q6UW68 189 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 NXPE4Q6UWF7 544 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 CLEC18BQ6UXF7 455 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 C3orf62Q6ZUJ4 267 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 CPEB2Q7Z5Q1 589 aaKnown RBP9.86□□□□□ -0.83
CAPN1-225ENST00000533704 PPM1NQ8N819 430 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 CLEC18CQ8NCF0 446 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 OR4K1Q8NGD4 311 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 OR1N1Q8NGS0 311 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 CCT6BQ92526 530 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 PSMF1Q92530 271 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 LMF1Q96S06 567 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 CYTH2Q99418 400 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 CPNE1Q99829 537 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 TUBB6Q9BUF5 446 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 FAM129AQ9BZQ8 928 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.86□□□□□ -0.83
CAPN1-225ENST00000533704 ZNF700Q9H0M5 742 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 RHBGQ9H310 441 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 PELI2Q9HAT8 420 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 AGPAT4Q9NRZ5 378 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 WWOXQ9NZC7 414 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 OARD1Q9Y530 152 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 SLC22A7Q9Y694 548 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 KCNE2Q9Y6J6 123 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 MAST4O15021 2626 aa9.86□□□□□ -0.83
CAPN1-225ENST00000533704 RELNP78509 3460 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 LOC102723996A0A087X1L8 192 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 CTAGE15A4D2H0 777 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 ANKUB1A6NFN9 424 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 PCDH17O14917 1159 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 CHST10O43529 356 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 GALR3O60755 368 aaPredicted RBP9.85□□□□□ -0.83
CAPN1-225ENST00000533704 B4GALT2O60909 372 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 H2AFYO75367 372 aaKnown RBP9.85□□□□□ -0.83
CAPN1-225ENST00000533704 FAM155BO75949 473 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 STMN1P16949 149 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 ALOX12P18054 663 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 GMPRP36959 345 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 GP5P40197 560 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 MAGEA4P43358 317 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 TSFMP43897 325 aaKnown RBP9.85□□□□□ -0.83
CAPN1-225ENST00000533704 HNMTP50135 292 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 GPX6P59796 221 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 SKP1P63208 163 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 SLC7A5Q01650 507 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 ZNF33BQ06732 778 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 CKAP4Q07065 602 aaKnown RBP9.85□□□□□ -0.83
CAPN1-225ENST00000533704 PWP1Q13610 501 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 SLMAPQ14BN4 828 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 ABRAXAS2Q15018 415 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 FBXO48Q5FWF7 155 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 ABHD17BQ5VST6 288 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 FCRLBQ6BAA4 426 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 IGFL2Q6UWQ7 119 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 RAPH1Q70E73 1250 aa9.85□□□□□ -0.83
CAPN1-225ENST00000533704 ABHD13Q7L211 337 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms