RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZYG11AQ6WRX3 759 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 OVCH1Q7RTY7 1134 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 PRSS41Q7RTY9 318 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 VN1R5Q7Z5H4 357 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 LAS2Q8IYD9 372 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 AFAP1L2Q8N4X5 818 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 AMER3Q8N944 861 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 TTLQ8NG68 377 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 OR9A4Q8NGU2 314 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 ZCCHC10Q8TBK6 192 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 ZNF483Q8TF39 744 aaPredicted RBP11.39□□□□□ -0.59
SSBP3-214ENST00000533209 FKBP10Q96AY3 582 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 APOPT1Q96IL0 206 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 SEC16BQ96JE7 1060 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 ERVK-6Q9BXR3 956 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 SLC6A16Q9GZN6 736 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 AICDAQ9GZX7 198 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 NOL11Q9H8H0 719 aaKnown RBP11.39□□□□□ -0.59
SSBP3-214ENST00000533209 ZNF304Q9HCX3 659 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 TCFL5Q9UL49 500 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 CDC14AQ9UNH5 594 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 SLC22A7Q9Y694 548 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 FER1L5A0AVI2 2057 aa11.39□□□□□ -0.59
SSBP3-214ENST00000533209 CACNA1BQ00975 2339 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 NBEAQ8NFP9 2946 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 ANKDD1BA6NHY2 528 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 PPP6CO00743 305 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 RGS16O15492 202 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-214ENST00000533209 UGDHO60701 494 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 CLEC3AO75596 197 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 NSA2O95478 260 aaKnown RBP11.38□□□□□ -0.59
SSBP3-214ENST00000533209 TBX6O95947 436 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-214ENST00000533209 RECKO95980 971 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 ALBP02768 609 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 SERPINA6P08185 405 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 PIM1P11309 404 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-214ENST00000533209 CREB1P16220 341 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 IL1RNP18510 177 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 IMPDH1P20839 514 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 FBLP22087 321 aaKnown RBP11.38□□□□□ -0.59
SSBP3-214ENST00000533209 GSTM2P28161 218 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 HNF4AP41235 474 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 PRKAA2P54646 552 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 FOXL2P58012 376 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 RGS1Q08116 209 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 TRAF3Q13114 568 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 DSG2Q14126 1118 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 HIST2H2ACQ16777 129 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-214ENST00000533209 CRTC2Q53ET0 693 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-214ENST00000533209 UNC50Q53HI1 259 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 TNFAIP8L3Q5GJ75 292 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 ZNF678Q5SXM1 525 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 LIPJQ5W064 366 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 HIST2H2AA3Q6FI13 130 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 GRHL2Q6ISB3 625 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 MED27Q6P2C8 311 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 SYVN1Q86TM6 617 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 PDSS2Q86YH6 399 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 SLC22A9Q8IVM8 553 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 TMEM151BQ8IW70 566 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 L3MBTL4Q8NA19 623 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 ZSCAN1Q8NBB4 408 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 MYRIPQ8NFW9 859 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 OR7G3Q8NG95 312 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 OR52B6Q8NGF0 335 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 COL26A1Q96A83 441 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 ZBTB9Q96C00 473 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 L3HYPDHQ96EM0 354 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 MMABQ96EY8 250 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-214ENST00000533209 TMEM237Q96Q45 408 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 NTMT1Q9BV86 223 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 SLC26A1Q9H2B4 701 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 RHBGQ9H310 441 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 KLHL31Q9H511 634 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 ACTR8Q9H981 624 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 SEMA4BQ9NPR2 832 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-214ENST00000533209 ACSS2Q9NR19 701 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 CTSFQ9UBX1 484 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 GPN3Q9UHW5 284 aaPredicted RBP11.38□□□□□ -0.59
SSBP3-214ENST00000533209 PLLPQ9Y342 182 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 RNF11Q9Y3C5 154 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 LOC400499M0QZD8 3231 aa11.38□□□□□ -0.59
SSBP3-214ENST00000533209 IGLV3-12A0A075B6K2 115 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 VSTM2BA6NLU5 285 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 C4orf51C9J302 202 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 GALR3O60755 368 aaPredicted RBP11.37□□□□□ -0.59
SSBP3-214ENST00000533209 SPAG7O75391 227 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 B3GALT4O96024 378 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 CD63P08962 238 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 FURINP09958 794 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 ZNF888P0CJ79 500 aaPredicted RBP11.37□□□□□ -0.59
SSBP3-214ENST00000533209 SMIM10L1P0DMW3 83 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 PRKAR1AP10644 381 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 MYL2P10916 166 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 CPA3P15088 417 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 ALOX12P18054 663 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 TSPAN8P19075 237 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 HNRNPH1P31943 449 aaKnown RBP11.37□□□□□ -0.59
SSBP3-214ENST00000533209 AVPR1BP47901 424 aa11.37□□□□□ -0.59
SSBP3-214ENST00000533209 CCNG1P51959 295 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms