RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 AGBL2Q5U5Z8 902 aa15.79■□□□□ 0.12
PKP3-209ENST00000533069 IGFL3Q6UXB1 125 aa15.79■□□□□ 0.12
PKP3-209ENST00000533069 THOC6Q86W42 341 aaKnown RBP15.79■□□□□ 0.12
PKP3-209ENST00000533069 TCAIMQ8N3R3 496 aa15.79■□□□□ 0.12
PKP3-209ENST00000533069 OR2W6PQ8NHA6 318 aa15.79■□□□□ 0.12
PKP3-209ENST00000533069 DCAKDQ8WVC6 231 aa15.79■□□□□ 0.12
PKP3-209ENST00000533069 NEIL2Q969S2 332 aa15.79■□□□□ 0.12
PKP3-209ENST00000533069 CAB39LQ9H9S4 337 aa15.79■□□□□ 0.12
PKP3-209ENST00000533069 ANKHQ9HCJ1 492 aa15.79■□□□□ 0.12
PKP3-209ENST00000533069 MRPS2Q9Y399 296 aaKnown RBP15.79■□□□□ 0.12
PKP3-209ENST00000533069 ACTL7BQ9Y614 415 aa15.79■□□□□ 0.12
PKP3-209ENST00000533069 SLC22A7Q9Y694 548 aa15.79■□□□□ 0.12
PKP3-209ENST00000533069 TLDC2A0PJX2 215 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 PHGDHO43175 533 aaKnown RBP15.78■□□□□ 0.12
PKP3-209ENST00000533069 OR1F1O43749 312 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 LCMT2O60294 686 aaKnown RBP15.78■□□□□ 0.12
PKP3-209ENST00000533069 SORBS2O94875 1100 aaKnown RBP15.78■□□□□ 0.12
PKP3-209ENST00000533069 STATHP02808 62 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 HEXBP07686 556 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 CCDC166P0CW27 439 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 CXCR2P25025 360 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 SKP1P63208 163 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 COLEC12Q5KU26 742 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 CDKL4Q5MAI5 379 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 UBAP2Q5T6F2 1119 aaKnown RBP15.78■□□□□ 0.12
PKP3-209ENST00000533069 ATG9BQ674R7 924 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 NIPAL1Q6NVV3 410 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 JMJD6Q6NYC1 403 aaPredicted RBP15.78■□□□□ 0.12
PKP3-209ENST00000533069 ZC3H7AQ8IWR0 971 aaKnown RBP15.78■□□□□ 0.12
PKP3-209ENST00000533069 KLHDC8AQ8IYD2 350 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 OR9A4Q8NGU2 314 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 EPS8L3Q8TE67 593 aaKnown RBP15.78■□□□□ 0.12
PKP3-209ENST00000533069 PNPLA2Q96AD5 504 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 TSNARE1Q96NA8 513 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 AIF1LQ9BQI0 150 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 LHPPQ9H008 270 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 ZNF552Q9H707 407 aaPredicted RBP15.78■□□□□ 0.12
PKP3-209ENST00000533069 TMBIM4Q9HC24 238 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 ZFP69BQ9UJL9 534 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 SLC22A14Q9Y267 594 aa15.78■□□□□ 0.12
PKP3-209ENST00000533069 SEC16AO15027 2179 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 TTLL8A6PVC2 850 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 HMGB1P1B2RPK0 211 aaPredicted RBP15.77■□□□□ 0.12
PKP3-209ENST00000533069 FFAR3O14843 346 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 GPR42O15529 346 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 NDUFS4O43181 175 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 FAM155BO75949 473 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 BMP10O95393 424 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 CD1DP15813 335 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 IL1RNP18510 177 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 GNAZP19086 355 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 GCAP28676 217 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 AHRP35869 848 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 SCTRP47872 440 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 SLC6A12P48065 614 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 MAT1AQ00266 395 aaKnown RBP15.77■□□□□ 0.12
PKP3-209ENST00000533069 REEP5Q00765 189 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 MEF2AQ02078 507 aaPredicted RBP15.77■□□□□ 0.12
PKP3-209ENST00000533069 RGS1Q08116 209 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 HERC3Q15034 1050 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 TGFBIQ15582 683 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 CATSPEREQ5SY80 951 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 NXPE4Q6UWF7 544 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 TIFABQ6ZNK6 161 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 NDUFAF7Q7L592 441 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 LAPTM4BQ86VI4 370 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 ATCAYQ86WG3 371 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 GPSM1Q86YR5 675 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 KCT2Q8NC54 265 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 ZCCHC10Q8TBK6 192 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 ACMSDQ8TDX5 336 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 MIB2Q96AX9 1013 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 RHBDF1Q96CC6 855 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 UBXN10Q96LJ8 280 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 MACROD1Q9BQ69 325 aa15.77■□□□□ 0.12
PKP3-209ENST00000533069 CNOT10Q9H9A5 744 aaKnown RBP15.77■□□□□ 0.12
PKP3-209ENST00000533069 MASP2O00187 686 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 WDR47O94967 919 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 KRT15P19012 456 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 VARSP26640 1264 aaKnown RBP15.76■□□□□ 0.11
PKP3-209ENST00000533069 CRABP2P29373 138 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 CD97P48960 835 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 MLLT10P55197 1068 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 EFTUD2Q15029 972 aaKnown RBP eCLIP15.76■□□□□ 0.112e-6■■■■■ 39.1
PKP3-209ENST00000533069 SYT16Q17RD7 645 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 AGAP7PQ5VUJ5 663 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 SLC6A19Q695T7 634 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 PRSS41Q7RTY9 318 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 TMPRSS11BQ86T26 416 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 LCA5Q86VQ0 697 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 AFAP1L2Q8N4X5 818 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 EFCAB3Q8N7B9 438 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 RBMXL3Q8N7X1 1067 aaKnown RBP15.76■□□□□ 0.11
PKP3-209ENST00000533069 NT5CQ8TCD5 201 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 C8orf44Q96CB5 159 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 AGAP4Q96P64 663 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 CAPS2Q9BXY5 557 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 ZNF160Q9HCG1 818 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 SLAMF7Q9NQ25 335 aa15.76■□□□□ 0.11
PKP3-209ENST00000533069 RIC8BQ9NVN3 520 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms