RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 PLD3Q8IV08 490 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 SLC22A9Q8IVM8 553 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 ARMC2Q8NEN0 867 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 ATP6V1E2Q96A05 226 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 RERGQ96A58 199 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 MVB12AQ96EY5 273 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 FAM111AQ96PZ2 611 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 OR2A5Q96R48 311 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 ING2Q9H160 280 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 VIPAS39Q9H9C1 493 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 MKS1Q9NXB0 559 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 GPRC5BQ9NZH0 403 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 SLC17A7Q9P2U7 560 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 NDOR1Q9UHB4 597 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 ANAPC2Q9UJX6 822 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 NXT1Q9UKK6 140 aaKnown RBP12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 EMCNQ9ULC0 261 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 PLLPQ9Y342 182 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 ASB1Q9Y576 335 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 PCDHGB7Q9Y5F8 929 aa12.33□□□□□ -0.44
TRAPPC4-212ENST00000533058 KCNE1BA0A087WTH5 132 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 LOC105369274A0A096LPK9 316 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 LOC102723532A0A0G2JNH3 316 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 FEZF1A0PJY2 475 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 HYKKA2RU49 373 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 H0YGG7 62 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 STX16-NPEPL1H3BU86 382 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 TXNDC9O14530 226 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 STX16O14662 325 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 KLK8O60259 260 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 NRP2O60462 931 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 SBK3P0C264 359 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 FOLR3P41439 243 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 RRADP55042 308 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 VSX2P58304 361 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 ARF3P61204 181 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 MAGOHP61326 146 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 CSNK1G2P78368 415 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 MEF2AQ02078 507 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 IRF8Q02556 426 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 GTF2H2Q13888 395 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 RBBP5Q15291 538 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 PCBP2Q15366 365 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 RBBP7Q16576 425 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 MUM1Q2TAK8 710 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 LACTB2Q53H82 288 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 CFAP157Q5JU67 520 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 GARNL3Q5VVW2 1013 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 GTF2H2CQ6P1K8 395 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 ATG14Q6ZNE5 492 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 GOLGA7Q7Z5G4 137 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 KLHDC8AQ8IYD2 350 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 OR4N4Q8N0Y3 316 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 CCNYL1Q8N7R7 359 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 RDH11Q8TC12 318 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 TCP10LQ8TDR4 215 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 SREK1Q8WXA9 508 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 CCDC126Q96EE4 140 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 AIF1LQ9BQI0 150 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 PELI2Q9HAT8 420 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 PTRH2Q9Y3E5 179 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 ACTL7BQ9Y614 415 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 BAHCC1Q9P281 2608 aa12.32□□□□□ -0.44
TRAPPC4-212ENST00000533058 BSNQ9UPA5 3926 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 BOD1L1Q8NFC6 3051 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 ARGFXA6NJG6 315 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 VSTM2BA6NLU5 285 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 J3QKU1 62 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 OR1F1O43749 312 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 SLC28A2O43868 658 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 CNOT3O75175 753 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 SUPT7LO94864 414 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 SERPIND1P05546 499 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 C1GALT1C1LP0DN25 315 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 VARSP26640 1264 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 PRKAA2P54646 552 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 SOX8P57073 446 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 RPS15AP62244 130 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 HERVK_113P63132 956 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 CHIT1Q13231 466 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 SLBPQ14493 270 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 NKG7Q16617 165 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 HIST2H2ACQ16777 129 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 AGBL2Q5U5Z8 902 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 HIST2H2AA3Q6FI13 130 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 MRGPREQ86SM8 312 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 KRT78Q8N1N4 520 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 TMEM151AQ8N4L1 468 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 ANKRD42Q8N9B4 389 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 ABHD11Q8NFV4 315 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 THAP11Q96EK4 314 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 FER1L6-AS2Q96M78 137 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 PAIP2Q9BPZ3 127 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 ERVK-6Q9BXR3 956 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 TRIM55Q9BYV6 548 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 IPPKQ9H8X2 491 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 ACTR8Q9H981 624 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 SEMA4BQ9NPR2 832 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 ZNF71Q9NQZ8 489 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 ACSS2Q9NR19 701 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms