RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 MOCOSQ96EN8 888 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 PDLIM5Q96HC4 596 aaKnown RBP17.92■□□□□ 0.46
SSH3-209ENST00000532600 VN1R1Q9GZP7 353 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 ZNF700Q9H0M5 742 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 ACSS3Q9H6R3 686 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 HCN3Q9P1Z3 774 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 MKL2Q9ULH7 1088 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 CORO1CQ9ULV4 474 aaPredicted RBP17.92■□□□□ 0.46
SSH3-209ENST00000532600 COPG1Q9Y678 874 aaKnown RBP17.92■□□□□ 0.46
SSH3-209ENST00000532600 CPAMD8Q8IZJ3 1885 aa17.92■□□□□ 0.46
SSH3-209ENST00000532600 CDC7O00311 574 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 RIPK2O43353 540 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 DNAJB6O75190 326 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 AGFG2O95081 481 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 SERPINA7P05543 415 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 ZNF37AP17032 561 aaPredicted RBP17.91■□□□□ 0.46
SSH3-209ENST00000532600 CCND1P24385 295 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 AVPR1BP47901 424 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 NDUFA9Q16795 377 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 CATSPEREQ5SY80 951 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 HIST2H2BCQ6DN03 193 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 CAPN13Q6MZZ7 669 aaPredicted RBP17.91■□□□□ 0.46
SSH3-209ENST00000532600 WDR93Q6P2C0 686 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 LANCL3Q6ZV70 420 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 ASPGQ86U10 573 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 ZCCHC10Q8TBK6 192 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 VPS50Q96JG6 964 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 IMMP1LQ96LU5 166 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 LMF1Q96S06 567 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 SARGQ9BW04 601 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 PARD6BQ9BYG5 372 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 SLC29A3Q9BZD2 475 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 RHOJQ9H4E5 214 aa17.91■□□□□ 0.46
SSH3-209ENST00000532600 MTO1Q9Y2Z2 717 aaKnown RBP17.91■□□□□ 0.46
SSH3-209ENST00000532600 IGHV3-20A0A0C4DH32 117 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 E2F3O00716 465 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 GUCA1CO95843 209 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 HIST1H2AGP0C0S8 130 aaPredicted RBP17.9■□□□□ 0.46
SSH3-209ENST00000532600 HIST1H2ADP20671 130 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 GP5P40197 560 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 TSFMP43897 325 aaKnown RBP17.9■□□□□ 0.46
SSH3-209ENST00000532600 AP1S2P56377 157 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 TAS2R39P59534 338 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 ZNF169Q14929 603 aaPredicted RBP17.9■□□□□ 0.46
SSH3-209ENST00000532600 IRAK1BP1Q5VVH5 260 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 TRMT10CQ7L0Y3 403 aaKnown RBP17.9■□□□□ 0.46
SSH3-209ENST00000532600 CEP97Q8IW35 865 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 AFAP1L2Q8N4X5 818 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 SIRT6Q8N6T7 355 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 OR51Q1Q8NH59 317 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 PRR7Q8TB68 274 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 ANKRD49Q8WVL7 239 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 SLC13A3Q8WWT9 602 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 CDKL2Q92772 493 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 NEIL2Q969S2 332 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 VPS39Q96JC1 886 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 HIST1H2AHQ96KK5 128 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 CNDP1Q96KN2 507 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 RBBP8Q99708 897 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 CPNE1Q99829 537 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 HIST1H2AJQ99878 128 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 H2AFJQ9BTM1 129 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 NSMCE4AQ9NXX6 385 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 PLA2G3Q9NZ20 509 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 PTGFRNQ9P2B2 879 aa17.9■□□□□ 0.46
SSH3-209ENST00000532600 FAM95CA0A1B0GW59 222 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 NPEPPSL1A6NEC2 478 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 RDH16O75452 317 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 WISP3O95389 354 aaPredicted RBP17.89■□□□□ 0.45
SSH3-209ENST00000532600 B3GALT4O96024 378 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 ABHD2P08910 425 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 ITGAMP11215 1152 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 CXCR2P25025 360 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 PHBP35232 272 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 XCR1P46094 333 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 CCR8P51685 355 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 UAP1Q16222 522 aaPredicted RBP17.89■□□□□ 0.45
SSH3-209ENST00000532600 B3GNTL1Q67FW5 361 aaPredicted RBP17.89■□□□□ 0.45
SSH3-209ENST00000532600 CAMKVQ8NCB2 501 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 OR5T3Q8NGG3 340 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 AENQ8WTP8 325 aaKnown RBP17.89■□□□□ 0.45
SSH3-209ENST00000532600 SSC4DQ8WTU2 575 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 MRRFQ96E11 262 aaKnown RBP17.89■□□□□ 0.45
SSH3-209ENST00000532600 CYTH2Q99418 400 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 HAUS8Q9BT25 410 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 EPS8L2Q9H6S3 715 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 ERRFI1Q9UJM3 462 aaPredicted RBP17.89■□□□□ 0.45
SSH3-209ENST00000532600 RAB21Q9UL25 225 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 NAALAD2Q9Y3Q0 740 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 DOPEY1Q5JWR5 2465 aa17.89■□□□□ 0.45
SSH3-209ENST00000532600 HMX2A2RU54 273 aa17.88■□□□□ 0.45
SSH3-209ENST00000532600 ENO2P09104 434 aaPredicted RBP17.88■□□□□ 0.45
SSH3-209ENST00000532600 C8orf89P0DMQ9 161 aa17.88■□□□□ 0.45
SSH3-209ENST00000532600 SAT1P21673 171 aa17.88■□□□□ 0.45
SSH3-209ENST00000532600 NAB1Q13506 487 aa17.88■□□□□ 0.45
SSH3-209ENST00000532600 TLR1Q15399 786 aa17.88■□□□□ 0.45
SSH3-209ENST00000532600 C18orf21Q32NC0 220 aaPredicted RBP17.88■□□□□ 0.45
SSH3-209ENST00000532600 GRHL3Q8TE85 626 aa17.88■□□□□ 0.45
SSH3-209ENST00000532600 TSNARE1Q96NA8 513 aa17.88■□□□□ 0.45
SSH3-209ENST00000532600 GPR22Q99680 433 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms