RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 NGFP01138 241 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 CXCL10P02778 98 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 YES1P07947 543 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 PAX1P15863 534 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 AMD1P17707 334 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 GJB2P29033 226 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 SFNP31947 248 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 CEACAM8P31997 349 aaPredicted RBP2.66□□□□□ -1.98
CD44-234ENST00000531873 OR3A3P47888 321 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 CLCN4P51793 760 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 OR1D5P58170 312 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 SRP54P61011 504 aaKnown RBP2.66□□□□□ -1.98
CD44-234ENST00000531873 GALK2Q01415 458 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 ABRQ12979 859 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 SRSF9Q13242 221 aaKnown RBP eCLIP2.66□□□□□ -1.98
CD44-234ENST00000531873 GAMTQ14353 236 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 ZNF585BQ52M93 769 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 C20orf194Q5TEA3 1177 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 PRAMEF7Q5VXH5 474 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 NEK5Q6P3R8 708 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 DHRS11Q6UWP2 260 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 TMEM207Q6UWW9 146 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 MFSD7Q6UXD7 560 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 ISLR2Q6UXK2 745 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 DLEU7Q6UYE1 221 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 RBMS3Q6XE24 437 aaKnown RBP2.66□□□□□ -1.98
CD44-234ENST00000531873 BATF2Q8N1L9 274 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 METTL27Q8N6F8 245 aaPredicted RBP2.66□□□□□ -1.98
CD44-234ENST00000531873 TEX9Q8N6V9 391 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 POC1AQ8NBT0 407 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 SLC37A3Q8NCC5 494 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 CNNM3Q8NE01 707 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 TMEM185AQ8NFB2 350 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 OR7A2PQ8NGA2 310 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 OR4C15Q8NGM1 316 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 OR13C3Q8NGS6 347 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 OR2T11Q8NH01 316 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 OR4A16Q8NH70 328 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 OR1L3Q8NH93 324 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 CD99L2Q8TCZ2 262 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 CD101Q93033 1021 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 SLCO4A1Q96BD0 722 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 LYZL4Q96KX0 146 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 FAM111AQ96PZ2 611 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 NAP1L3Q99457 506 aaPredicted RBP2.66□□□□□ -1.98
CD44-234ENST00000531873 TEX13AQ9BXU3 409 aaPredicted RBP2.66□□□□□ -1.98
CD44-234ENST00000531873 KRT23Q9C075 422 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 WWTR1Q9GZV5 400 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 NAPBQ9H115 298 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 HIPK2Q9H2X6 1198 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 DPEP3Q9H4B8 488 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 EGLN3Q9H6Z9 239 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 ZNF556Q9HAH1 456 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 ZCCHC3Q9NUD5 404 aaKnown RBP2.66□□□□□ -1.98
CD44-234ENST00000531873 PIGVQ9NUD9 493 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 FLRT3Q9NZU0 649 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 ACTR3BQ9P1U1 418 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 IL36AQ9UHA7 158 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 MAN1B1Q9UKM7 699 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 PPP2R2CQ9Y2T4 447 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 SH3GLB1Q9Y371 365 aa2.66□□□□□ -1.98
CD44-234ENST00000531873 MACROD2A1Z1Q3 448 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 CCDC162PA2VCL2 907 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 ZNF732B4DXR9 585 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 IKBKBO14920 756 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 CHUKO15111 745 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 PSMD3O43242 534 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 CIDEAO60543 219 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 SOCS5O75159 536 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 CDK2AP2O75956 126 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 KRT33AO76009 404 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 PTBP3O95758 552 aaKnown RBP2.65□□□□□ -1.99
CD44-234ENST00000531873 PDGFBP01127 241 aaPredicted RBP2.65□□□□□ -1.99
CD44-234ENST00000531873 CHRNGP07510 517 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 UMODP07911 640 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 MMP10P09238 476 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 FGF3P11487 239 aaPredicted RBP2.65□□□□□ -1.99
CD44-234ENST00000531873 ODC1P11926 461 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 ETS1P14921 441 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 CPA3P15088 417 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 B4GALT1P15291 398 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 AREGP15514 252 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 ACP1P24666 158 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 RPA1P27694 616 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 HPDP32754 393 aaPredicted RBP2.65□□□□□ -1.99
CD44-234ENST00000531873 CETN2P41208 172 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 CNN1P51911 297 aaKnown RBP2.65□□□□□ -1.99
CD44-234ENST00000531873 FOXG1P55316 489 aaPredicted RBP2.65□□□□□ -1.99
CD44-234ENST00000531873 HTD2P86397 168 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 ARL16Q0P5N6 197 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 GPR50Q13585 617 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 TSTA3Q13630 321 aaPredicted RBP2.65□□□□□ -1.99
CD44-234ENST00000531873 CDH18Q13634 790 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 TRIM29Q14134 588 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 SPSB3Q6PJ21 355 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 LEKR1Q6ZMV7 388 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 SLC24A5Q71RS6 500 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 G2E3Q7L622 706 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 SLC16A9Q7RTY1 509 aa2.65□□□□□ -1.99
CD44-234ENST00000531873 MIER3Q7Z3K6 550 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms