RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 CATSPEREQ5SY80 951 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 STEAP4Q687X5 459 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 SYDE1Q6ZW31 735 aaPredicted RBP15.85■□□□□ 0.13
CPSF1-207ENST00000531727 STRA8Q7Z7C7 330 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 SLC34A3Q8N130 599 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 BEST3Q8N1M1 668 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 TBC1D19Q8N5T2 526 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 ZNF740Q8NDX6 193 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 PLPP5Q8NEB5 264 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 OR5T3Q8NGG3 340 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 RELTQ969Z4 430 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 LRRC39Q96DD0 335 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 MOCOSQ96EN8 888 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 PEX11GQ96HA9 241 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 PDLIM5Q96HC4 596 aaKnown RBP15.85■□□□□ 0.13
CPSF1-207ENST00000531727 PWWP2AQ96N64 755 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 WDR83Q9BRX9 315 aaKnown RBP15.85■□□□□ 0.13
CPSF1-207ENST00000531727 RBCK1Q9BYM8 510 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 KCNK13Q9HB14 408 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 TRMT1Q9NXH9 659 aaKnown RBP15.85■□□□□ 0.13
CPSF1-207ENST00000531727 TEX264Q9Y6I9 313 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 ZGRF1Q86YA3 2104 aa15.85■□□□□ 0.13
CPSF1-207ENST00000531727 MAGEB17A8MXT2 336 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 GALR3O60755 368 aaPredicted RBP15.84■□□□□ 0.13
CPSF1-207ENST00000531727 CDC123O75794 336 aaPredicted RBP15.84■□□□□ 0.13
CPSF1-207ENST00000531727 GUCA1CO95843 209 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 ALOX12P18054 663 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 MST1P26927 711 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 SKP1P63208 163 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 NSDHLQ15738 373 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 ZNF766Q5HY98 468 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 FCRLBQ6BAA4 426 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 NIPAL1Q6NVV3 410 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 PAPD4Q6PIY7 484 aaKnown RBP15.84■□□□□ 0.13
CPSF1-207ENST00000531727 SBSNQ6UWP8 590 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 CRLF3Q8IUI8 442 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 NT5CQ8TCD5 201 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 SLC5A11Q8WWX8 675 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 NEIL2Q969S2 332 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 LPAR4Q99677 370 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 MMP25Q9NPA2 562 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 SEC14L3Q9UDX4 400 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 PCDHGB6Q9Y5F9 930 aa15.84■□□□□ 0.13
CPSF1-207ENST00000531727 UNC5CO95185 931 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 SERPIND1P05546 499 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 FHP07954 510 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 AHRP35869 848 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 SCTRP47872 440 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 DR1Q01658 176 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 ACTN3Q08043 901 aaPredicted RBP15.83■□□□□ 0.12
CPSF1-207ENST00000531727 RGS1Q08116 209 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 TUBA3CQ13748 450 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 FRG1Q14331 258 aaKnown RBP15.83■□□□□ 0.12
CPSF1-207ENST00000531727 CSHL1Q14406 222 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 MEP1AQ16819 746 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 PPP1R3AQ16821 1122 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 DEFB134Q4QY38 66 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 TUBA3EQ6PEY2 450 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 TMEM207Q6UWW9 146 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 KLHL7Q8IXQ5 586 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 TSLPQ969D9 159 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 TBC1D20Q96BZ9 403 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 RUNDC3BQ96NL0 473 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 SPNS1Q9H2V7 528 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 KCNF1Q9H3M0 494 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 ZFP69BQ9UJL9 534 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 IKZF3Q9UKT9 509 aa15.83■□□□□ 0.12
CPSF1-207ENST00000531727 CHST10O43529 356 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 B3GALT4O96024 378 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 ZNF888P0CJ79 500 aaPredicted RBP15.82■□□□□ 0.12
CPSF1-207ENST00000531727 ZNF37AP17032 561 aaPredicted RBP15.82■□□□□ 0.12
CPSF1-207ENST00000531727 JAK1P23458 1154 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 ITGA8P53708 1063 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 ARL4CP56559 192 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 OR4D2P58180 307 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 REEP5Q00765 189 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 PMP22Q01453 160 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 USP10Q14694 798 aaKnown RBP15.82■□□□□ 0.12
CPSF1-207ENST00000531727 ABHD13Q7L211 337 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 THOC6Q86W42 341 aaKnown RBP15.82■□□□□ 0.12
CPSF1-207ENST00000531727 TICAM1Q8IUC6 712 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 MDS2Q8NDY4 140 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 ANKRD7Q92527 254 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 CAPZA3Q96KX2 299 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 TSNARE1Q96NA8 513 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 SIGLEC12Q96PQ1 595 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 NPAS2Q99743 824 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 UTP23Q9BRU9 249 aaKnown RBP15.82■□□□□ 0.12
CPSF1-207ENST00000531727 PELI2Q9HAT8 420 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 ZFATQ9P243 1243 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 DYRK1BQ9Y463 629 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 PSAT1Q9Y617 370 aa15.82■□□□□ 0.12
CPSF1-207ENST00000531727 DNAJB6O75190 326 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 SEC31AO94979 1220 aaKnown RBP15.81■□□□□ 0.12
CPSF1-207ENST00000531727 SVILO95425 2214 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 CD96P40200 585 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 SLC26A5P58743 744 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 OLR1P78380 273 aa15.81■□□□□ 0.12
CPSF1-207ENST00000531727 SRSF11Q05519 484 aaKnown RBP15.81■□□□□ 0.12
CPSF1-207ENST00000531727 MGAT5Q09328 741 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms