RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ZNF225Q9UK10 706 aa13.77□□□□□ -0.21
CPSF1-206ENST00000531480 PPT2Q9UMR5 302 aa13.77□□□□□ -0.21
CPSF1-206ENST00000531480 ANGPTL3Q9Y5C1 460 aa13.77□□□□□ -0.21
CPSF1-206ENST00000531480 PTPRQQ9UMZ3 2332 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 LOC101059948A0A1B0GTJ6 334 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 A0A1B0GTL3 188 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 TM9SF1O15321 606 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 RRP8O43159 456 aaKnown RBP13.76□□□□□ -0.21
CPSF1-206ENST00000531480 SPAG7O75391 227 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 OTCP00480 354 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 EIF2S1P05198 315 aaKnown RBP13.76□□□□□ -0.21
CPSF1-206ENST00000531480 KLK3P07288 261 aaPredicted RBP13.76□□□□□ -0.21
CPSF1-206ENST00000531480 RAB40ALP0C0E4 278 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 CCNYL3P0C7X3 344 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 DHRS4L1P0CG22 281 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 DCDP81605 110 aaKnown RBP13.76□□□□□ -0.21
CPSF1-206ENST00000531480 TLE3Q04726 772 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 CLCQ05315 142 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 C10orf62Q5T681 223 aaPredicted RBP13.76□□□□□ -0.21
CPSF1-206ENST00000531480 LIPMQ5VYY2 423 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 MRPL14Q6P1L8 145 aaKnown RBP13.76□□□□□ -0.21
CPSF1-206ENST00000531480 TTLL10Q6ZVT0 673 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 RPS27LQ71UM5 84 aaKnown RBP13.76□□□□□ -0.21
CPSF1-206ENST00000531480 KCT2Q8NC54 265 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 ARMC2Q8NEN0 867 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 OR7G3Q8NG95 312 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 WDR20Q8TBZ3 569 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 ZNF473Q8WTR7 871 aaKnown RBP13.76□□□□□ -0.21
CPSF1-206ENST00000531480 SNRNP27Q8WVK2 155 aaKnown RBP13.76□□□□□ -0.21
CPSF1-206ENST00000531480 MAGEB10Q96LZ2 347 aaPredicted RBP13.76□□□□□ -0.21
CPSF1-206ENST00000531480 ZNF382Q96SR6 550 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 GPR87Q9BY21 358 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 IQCGQ9H095 443 aaKnown RBP13.76□□□□□ -0.21
CPSF1-206ENST00000531480 SLC26A1Q9H2B4 701 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 PSD3Q9NYI0 1048 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 ADGRE2Q9UHX3 823 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 MRPS2Q9Y399 296 aaKnown RBP13.76□□□□□ -0.21
CPSF1-206ENST00000531480 ZFYVE26Q68DK2 2539 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 CCDC88CQ9P219 2028 aa13.76□□□□□ -0.21
CPSF1-206ENST00000531480 LOC400499M0QZD8 3231 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 IGLV3-12A0A075B6K2 115 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 LRIT2A6NDA9 550 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 PPP6CO00743 305 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 NDUFS4O43181 175 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 EFSO43281 561 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 SUPT7LO94864 414 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 NSA2O95478 260 aaKnown RBP13.75□□□□□ -0.21
CPSF1-206ENST00000531480 CLDN9O95484 217 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 MLYCDO95822 493 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 RECKO95980 971 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 PIK3CBP42338 1070 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 CDH13P55290 713 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 LCP2Q13094 533 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 MPP2Q14168 576 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 RBBP5Q15291 538 aaKnown RBP13.75□□□□□ -0.21
CPSF1-206ENST00000531480 HIST2H2ACQ16777 129 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-206ENST00000531480 NDUFA9Q16795 377 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 NKAIN1Q4KMZ8 207 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 CRTC2Q53ET0 693 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-206ENST00000531480 HIST2H2AA3Q6FI13 130 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 MED27Q6P2C8 311 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 FRMD7Q6ZUT3 714 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 COX15Q7KZN9 410 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 C10orf107Q8IVU9 208 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 IL22RA1Q8N6P7 574 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 CT55Q8WUE5 264 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 FKBP10Q96AY3 582 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 CCNL2Q96S94 520 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-206ENST00000531480 MACROD1Q9BQ69 325 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 C17orf62Q9BQA9 187 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 DRC3Q9H069 523 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 CHST8Q9H2A9 424 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 ACTR8Q9H981 624 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 SEMA4BQ9NPR2 832 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-206ENST00000531480 TXLNGQ9NUQ3 528 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 IRAK4Q9NWZ3 460 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 STK38LQ9Y2H1 464 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 RNF11Q9Y3C5 154 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 PCDHGA11Q9Y5H2 935 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 ITPR1Q14643 2758 aa13.75□□□□□ -0.21
CPSF1-206ENST00000531480 SCN3AQ9NY46 2000 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 H0YIG0 161 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 H3BQF6 201 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 KLK10O43240 276 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 TRIM13O60858 407 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 ZWINTO95229 277 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 ALBP02768 609 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 LIFP15018 202 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 AGXTP21549 392 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 F8A1P23610 371 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 ALDH3A1P30838 453 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 CCNG1P51959 295 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 NAGLUP54802 743 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 PKNOX1P55347 436 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 RGS1Q08116 209 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 DSG2Q14126 1118 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 HERC3Q15034 1050 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 COL28A1Q2UY09 1125 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 ADNP2Q6IQ32 1131 aa13.74□□□□□ -0.21
CPSF1-206ENST00000531480 LETMD1Q6P1Q0 360 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms