RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 NAE1Q13564 534 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 VEZF1Q14119 521 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 DOC2AQ14183 400 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 GK3PQ14409 553 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 ZNF234Q14588 700 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 RAB30Q15771 203 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 GAB4Q2WGN9 574 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 SLC36A3Q495N2 470 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 SGO1Q5FBB7 561 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 ZC3H12BQ5HYM0 836 aaKnown RBP5.36□□□□□ -1.55
PCF11-205ENST00000530906 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.36□□□□□ -1.55
PCF11-205ENST00000530906 TTC23Q5W5X9 447 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 RAET1GQ6H3X3 334 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 SUSD1Q6UWL2 747 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 LCTLQ6UWM7 567 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 RFLNAQ6ZTI6 216 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 DET1Q7L5Y6 550 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 PATL1Q86TB9 770 aaKnown RBP5.36□□□□□ -1.55
PCF11-205ENST00000530906 IFNEQ86WN2 208 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 SYT12Q8IV01 421 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 VRK3Q8IV63 474 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 DCUN1D3Q8IWE4 304 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 SLC30A8Q8IWU4 369 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 YAF2Q8IY57 180 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 KRT78Q8N1N4 520 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 ZCCHC7Q8N3Z6 543 aaKnown RBP5.36□□□□□ -1.55
PCF11-205ENST00000530906 GALNT4Q8N4A0 578 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 CBR4Q8N4T8 237 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 RAB42Q8N4Z0 105 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 DHRSXQ8N5I4 330 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 OR9A1PQ8NGU1 263 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 ING5Q8WYH8 240 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 FGF13Q92913 245 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 RAD51AP1Q96B01 352 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 AURKBQ96GD4 344 aaPredicted RBP5.36□□□□□ -1.55
PCF11-205ENST00000530906 COX14Q96I36 57 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 CNBD2Q96M20 576 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 ADI1Q9BV57 179 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 CHID1Q9BWS9 393 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 RAB11FIP5Q9BXF6 653 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 C1QTNF7Q9BXJ2 289 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 NT5DC2Q9H857 520 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 RMI1Q9H9A7 625 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 PELI2Q9HAT8 420 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 SERHLQ9NQF3 203 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 CCDC177Q9NQR7 707 aaPredicted RBP5.36□□□□□ -1.55
PCF11-205ENST00000530906 FARSBQ9NSD9 589 aaKnown RBP5.36□□□□□ -1.55
PCF11-205ENST00000530906 DCAF13Q9NV06 445 aaKnown RBP5.36□□□□□ -1.55
PCF11-205ENST00000530906 DDX18Q9NVP1 670 aaKnown RBP5.36□□□□□ -1.55
PCF11-205ENST00000530906 USE1Q9NZ43 259 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 VAPAQ9P0L0 249 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 SPATA7Q9P0W8 599 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 IFT80Q9P2H3 777 aaPredicted RBP5.36□□□□□ -1.55
PCF11-205ENST00000530906 CD84Q9UIB8 345 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 CDH7Q9ULB5 785 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 ACSL5Q9ULC5 683 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 DMTF1Q9Y222 760 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 DLGAP4Q9Y2H0 992 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 NEUROG3Q9Y4Z2 214 aa5.36□□□□□ -1.55
PCF11-205ENST00000530906 C7orf72A4D263 438 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 TBC1D3BA6NDS4 549 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 DBX1A6NMT0 343 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 PRRT4C9JH25 899 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 C9JVG2 144 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 RNASET2O00584 256 aaKnown RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 SOCS2O14508 198 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 SCAMP2O15127 329 aaKnown RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 ACOX3O15254 700 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 DFNA5O60443 496 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 TBX19O60806 448 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 RNGTTO60942 597 aaKnown RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 CREG1O75629 220 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 DNAJB5O75953 348 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 SOD1P00441 154 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 APODP05090 189 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 CA3P07451 260 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 SMIM18P0DKX4 95 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 C1GALT1C1LP0DN25 315 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 MTHFD1P11586 935 aaKnown RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 COX7A2P14406 83 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 CDH2P19022 906 aaPredicted RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 C5AR1P21730 350 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 PTX3P26022 381 aaPredicted RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 ACADLP28330 430 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 PTPN6P29350 595 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 OXTRP30559 389 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 TIA1P31483 386 aaKnown RBP eCLIP5.35□□□□□ -1.55
PCF11-205ENST00000530906 MAGEA2P43356 314 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 TNFRSF4P43489 277 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ALDH3A2P51648 485 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ARFIP1P53367 373 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ATXN3P54252 364 aaPredicted RBP5.35□□□□□ -1.55
PCF11-205ENST00000530906 RAD23AP54725 363 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ARSFP54793 590 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 MTPNP58546 118 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ESRRGP62508 458 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 MYBPC1Q00872 1141 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 DMPKQ09013 629 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 RBBP4Q09028 425 aa5.35□□□□□ -1.55
PCF11-205ENST00000530906 ZNF763Q0D2J5 394 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms