RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PPIGQ13427 754 aaKnown RBP eCLIP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 GAB1Q13480 694 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 ELAVL3Q14576 367 aaKnown RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 HNRNPA1L2Q32P51 320 aaKnown RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 CATSPEREQ5SY80 951 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 PDE12Q6L8Q7 609 aaKnown RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 UNC5DQ6UXZ4 953 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 COMMD6Q7Z4G1 85 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 ANKRD13BQ86YJ7 626 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 ZC3H7AQ8IWR0 971 aaKnown RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 ETFBKMTQ8IXQ9 262 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 LRRC56Q8IYG6 542 aaPredicted RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 FNDC8Q8TC99 324 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 SLC5A11Q8WWX8 675 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 SGCDQ92629 289 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 FKBP10Q96AY3 582 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 BARD1Q99728 777 aaKnown RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 OR2AG1Q9H205 316 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 PALMDQ9NP74 551 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 MYNNQ9NPC7 610 aa16.55■□□□□ 0.24
BRCA2-204ENST00000530893 CCDC177Q9NQR7 707 aaPredicted RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 PAK1IP1Q9NWT1 392 aaPredicted RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 WARS2Q9UGM6 360 aaKnown RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 EXO1Q9UQ84 846 aaKnown RBP16.55■□□□□ 0.24
BRCA2-204ENST00000530893 ZNF99A8MXY4 864 aaPredicted RBP16.54■□□□□ 0.24
BRCA2-204ENST00000530893 PTGES3LE9PB15 166 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 ZNF182P17025 639 aaPredicted RBP16.54■□□□□ 0.24
BRCA2-204ENST00000530893 PTX3P26022 381 aaPredicted RBP16.54■□□□□ 0.24
BRCA2-204ENST00000530893 SELENOWP63302 87 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 CSNK2BP67870 215 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 SLC35A2P78381 396 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 FADDQ13158 208 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 SIM2Q14190 667 aaPredicted RBP16.54■□□□□ 0.24
BRCA2-204ENST00000530893 C16orf72Q14CZ0 275 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 EIF4HQ15056 248 aaKnown RBP16.54■□□□□ 0.24
BRCA2-204ENST00000530893 RAET1GQ6H3X3 334 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 KLHL35Q6PF15 583 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 NXPE4Q6UWF7 544 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 C12orf40Q86WS4 652 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 ATG16L2Q8NAA4 619 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 DRAXINQ8NBI3 349 aaPredicted RBP16.54■□□□□ 0.24
BRCA2-204ENST00000530893 OR2L2Q8NH16 312 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 CNIH3Q8TBE1 160 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 ING5Q8WYH8 240 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 TPD52L3Q96J77 140 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 PITX2Q99697 317 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 FUNDC2Q9BWH2 189 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 TBC1D23Q9NUY8 699 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 ENPP5Q9UJA9 477 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 LRRK1Q38SD2 2015 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 KIAA1549LQ6ZVL6 1849 aa16.54■□□□□ 0.24
BRCA2-204ENST00000530893 TMX2-CTNND1H3BSU7 103 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 PI15O43692 258 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 PAPLNO95428 1278 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 RB1P06400 928 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 FURINP09958 794 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 ZNF8P17098 575 aaPredicted RBP16.53■□□□□ 0.24
BRCA2-204ENST00000530893 CD247P20963 164 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 GALK1P51570 392 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 CRYBA2P53672 197 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 MVKQ03426 396 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 C9orf64Q5T6V5 341 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 IKBIPQ70UQ0 350 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 TRMT11Q7Z4G4 463 aaKnown RBP16.53■□□□□ 0.24
BRCA2-204ENST00000530893 B3GNT8Q7Z7M8 397 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 GALNT10Q86SR1 603 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 OR52N2Q8NGI0 321 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 LRRC3BQ96PB8 259 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 ZNF347Q96SE7 839 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 RAD21L1Q9H4I0 556 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 TMEM38AQ9H6F2 299 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 PRRC2BQ5JSZ5 2229 aaKnown RBP16.53■□□□□ 0.24
BRCA2-204ENST00000530893 E9PQ18 207 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 ADAMDEC1O15204 470 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 TLL1O43897 1013 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 GPR37L1O60883 481 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 NDUFS2O75306 463 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 DIRAS1O95057 198 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 NUDT7P0C024 238 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 C6P13671 934 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 ADRB3P13945 408 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 ACADLP28330 430 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 IL1RL1Q01638 556 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 EMX1Q04741 257 aaPredicted RBP16.53■□□□□ 0.24
BRCA2-204ENST00000530893 STARD3Q14849 445 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 PROX2Q3B8N5 592 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 TMEM52BQ4KMG9 183 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 FNDC3BQ53EP0 1204 aaKnown RBP16.53■□□□□ 0.24
BRCA2-204ENST00000530893 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.53■□□□□ 0.24
BRCA2-204ENST00000530893 ARMCX6Q7L4S7 300 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 NAGSQ8N159 534 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 METTL4Q8N3J2 472 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 OXR1Q8N573 874 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 ARRDC3Q96B67 414 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 PPP1R14BQ96C90 147 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 PPCDCQ96CD2 204 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 DGCR6LQ9BY27 220 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 CCDC90BQ9GZT6 254 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 PREBQ9HCU5 417 aa16.53■□□□□ 0.24
BRCA2-204ENST00000530893 GALNT8Q9NY28 637 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms