RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 GPATCH1Q9BRR8 931 aaKnown RBP9.78□□□□□ -0.84
COPB1-207ENST00000529866 SARGQ9BW04 601 aa9.78□□□□□ -0.84
COPB1-207ENST00000529866 ETNK1Q9HBU6 452 aa9.78□□□□□ -0.84
COPB1-207ENST00000529866 ZNF358Q9NW07 568 aa9.78□□□□□ -0.84
COPB1-207ENST00000529866 COL6A5A8TX70 2615 aa9.78□□□□□ -0.84
COPB1-207ENST00000529866 ATRQ13535 2644 aa9.78□□□□□ -0.84
COPB1-207ENST00000529866 FAM171A2A8MVW0 826 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 ARHGEF33A8MVX0 844 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 MAGEB17A8MXT2 336 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 FAM47E-STBD1D6RA91 191 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 H3BMM5 538 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 SGK494L7N484 410 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 ACOT7O00154 380 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 SMAPO00193 183 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 PROM1O43490 865 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 PEX1O43933 1283 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 NDUFS3O75489 264 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 CDC123O75794 336 aaPredicted RBP9.77□□□□□ -0.85
COPB1-207ENST00000529866 MATN4O95460 622 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 RPS3P23396 243 aaKnown RBP eCLIP9.77□□□□□ -0.857e-8■■■■■ 46.8
COPB1-207ENST00000529866 JAK1P23458 1154 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 RFC3P40938 356 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 KIR2DL3P43628 341 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 PNLIPRP1P54315 467 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 EIF3BP55884 814 aaKnown RBP9.77□□□□□ -0.85
COPB1-207ENST00000529866 MLF1P58340 268 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 RPS15AP62244 130 aaKnown RBP9.77□□□□□ -0.85
COPB1-207ENST00000529866 MPP1Q00013 466 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 KIF5AQ12840 1032 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 SNX1Q13596 522 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 SLC25A35Q3KQZ1 300 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 THEMIS2Q5TEJ8 643 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 ARSKQ6UWY0 536 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 LDB1Q86U70 411 aaPredicted RBP9.77□□□□□ -0.85
COPB1-207ENST00000529866 SULF2Q8IWU5 870 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 SYCE1Q8N0S2 351 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 RPRMLQ8N4K4 120 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 ZFP62Q8NB50 900 aaPredicted RBP9.77□□□□□ -0.85
COPB1-207ENST00000529866 PLPP5Q8NEB5 264 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 PPHLN1Q8NEY8 458 aaKnown RBP9.77□□□□□ -0.85
COPB1-207ENST00000529866 C16orf52Q8NHV5 167 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 ELP5Q8TE02 316 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 TSLPQ969D9 159 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 THAP11Q96EK4 314 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 C18orf12Q96KH6 178 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 RBCK1Q9BYM8 510 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 P2RY12Q9H244 342 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 LIME1Q9H400 295 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 PLSCR2Q9NRY7 297 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 RASSF1Q9NS23 344 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 MARCH4Q9P2E8 410 aaPredicted RBP9.77□□□□□ -0.85
COPB1-207ENST00000529866 TSR3Q9UJK0 312 aaKnown RBP9.77□□□□□ -0.85
COPB1-207ENST00000529866 TCAF1Q9Y4C2 921 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 HRH3Q9Y5N1 445 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 GTF3C1Q12789 2109 aa9.77□□□□□ -0.85
COPB1-207ENST00000529866 FN1P02751 2386 aaKnown RBP9.77□□□□□ -0.85
COPB1-207ENST00000529866 OR2W5A6NFC9 320 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 BCKDKO14874 412 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 PFDN6O15212 129 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 CD3EAPO15446 510 aaKnown RBP9.76□□□□□ -0.85
COPB1-207ENST00000529866 RDH16O75452 317 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 PDE9AO76083 593 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 STATHP02808 62 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 HRH2P25021 359 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 ACVR2AP27037 513 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 CDC25BP30305 580 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 ZFP36L2P47974 494 aaKnown RBP9.76□□□□□ -0.85
COPB1-207ENST00000529866 SKP1P63208 163 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 CRADDP78560 199 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 MEF2AQ02078 507 aaPredicted RBP9.76□□□□□ -0.85
COPB1-207ENST00000529866 RHAGQ02094 409 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 TMEM214Q6NUQ4 689 aaKnown RBP9.76□□□□□ -0.85
COPB1-207ENST00000529866 PAMR1Q6UXH9 720 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 CLEC9AQ6UXN8 241 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 B3GNT6Q6ZMB0 384 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 Q71RC1 249 aaPredicted RBP9.76□□□□□ -0.85
COPB1-207ENST00000529866 PRSS41Q7RTY9 318 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 SLC13A5Q86YT5 568 aaPredicted RBP9.76□□□□□ -0.85
COPB1-207ENST00000529866 PLD3Q8IV08 490 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 SPNS2Q8IVW8 549 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 CYP4Z2PQ8N1L4 340 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 KIF2BQ8N4N8 673 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 TMEM156Q8N614 296 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 OTUD6BQ8N6M0 293 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 CAMKVQ8NCB2 501 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 ZCCHC10Q8TBK6 192 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 PWWP2AQ96N64 755 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 DEFB126Q9BYW3 111 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 FAM129AQ9BZQ8 928 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 ABCF3Q9NUQ8 709 aa9.76□□□□□ -0.85
COPB1-207ENST00000529866 KCNE1BA0A087WTH5 132 aa9.75□□□□□ -0.85
COPB1-207ENST00000529866 OR14I1A6ND48 311 aa9.75□□□□□ -0.85
COPB1-207ENST00000529866 SAGE2PA6NJ88 616 aa9.75□□□□□ -0.85
COPB1-207ENST00000529866 E7ENX8 843 aa9.75□□□□□ -0.85
COPB1-207ENST00000529866 E7EVH7 732 aa9.75□□□□□ -0.85
COPB1-207ENST00000529866 NPIPA2E9PIF3 369 aa9.75□□□□□ -0.85
COPB1-207ENST00000529866 NPIPA3F8WFD2 350 aa9.75□□□□□ -0.85
COPB1-207ENST00000529866 H7BY64 318 aa9.75□□□□□ -0.85
COPB1-207ENST00000529866 PSIP1O75475 530 aaKnown RBP9.75□□□□□ -0.85
COPB1-207ENST00000529866 SLC16A8O95907 504 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms