RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 SGCGQ13326 291 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 SMAD4Q13485 552 aaKnown RBP16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 C6orf10Q5SRN2 563 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 TBC1D3GQ6DHY5 549 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 TBC1D3CQ6IPX1 549 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 CYP20A1Q6UW02 462 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 ARMC8Q8IUR7 673 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 TBC1D3Q8IZP1 549 aaPredicted RBP16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 FAM156AQ8NDB6 213 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 NRBF2Q96F24 287 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 VMP1Q96GC9 406 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 PPP3R2Q96LZ3 170 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 NRTNQ99748 197 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 UBE2ZQ9H832 354 aaPredicted RBP16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 SP140LQ9H930 580 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 FBRSQ9HAH7 460 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 C12orf10Q9HB07 376 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 CD320Q9NPF0 282 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 GPSM3Q9Y4H4 160 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 TESMINQ9Y4I5 508 aa16.09■□□□□ 0.17
CAPRIN1-207ENST00000529307 TMEM265A0A087WTH1 108 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 SOX1O00570 391 aaPredicted RBP16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 SEC24DO94855 1032 aaPredicted RBP16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 MSL3P1P0C860 447 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 CKMT2P17540 419 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 TEAD1P28347 426 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 HLCSP50747 726 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 MAPK10P53779 464 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 TRIM25Q14258 630 aaKnown RBP16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 SLC36A3Q495N2 470 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 HABP4Q5JVS0 413 aaKnown RBP16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 KIAA1161Q6NSJ0 714 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 SLC22A16Q86VW1 577 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 HORMAD1Q86X24 394 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 OXR1Q8N573 874 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 NATD1Q8N6N6 113 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 SELENOMQ8WWX9 145 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 SLCO4A1Q96BD0 722 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 MYOCQ99972 504 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 ZIM2Q9NZV7 527 aa16.08■□□□□ 0.17
CAPRIN1-207ENST00000529307 BBIP1A8MTZ0 92 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 FXYD1O00168 92 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 TAF4O00268 1085 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 JUPP14923 745 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 CCINQ13939 588 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 DOC2AQ14183 400 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 KIAA0040Q15053 153 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 FXNQ16595 210 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 TMEM31Q5JXX7 168 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 INTS11Q5TA45 600 aaKnown RBP16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 HACD2Q6Y1H2 254 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 LRRC56Q8IYG6 542 aaPredicted RBP16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 ASCC1Q8N9N2 400 aaKnown RBP16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 ELOVL6Q9H5J4 265 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 IL1RL2Q9HB29 575 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 LRTM1Q9HBL6 345 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 ENPP5Q9UJA9 477 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 SH2B3Q9UQQ2 575 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 NDUFAF1Q9Y375 327 aa16.08■□□□□ 0.16
CAPRIN1-207ENST00000529307 TCRBV3S1A0A5B6 114 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 DLGAP1O14490 977 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 SLC31A1O15431 190 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 C7P10643 843 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 CDH1P12830 882 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 NDUFV2P19404 249 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 GNPDA1P46926 289 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 POLR2JP52435 117 aaKnown RBP16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 COPZ1P61923 177 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 IRF8Q02556 426 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 TRAP1Q12931 704 aaKnown RBP16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 PTGR1Q14914 329 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 XKR6Q5GH73 641 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 PAGE3Q5JUK9 113 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 PDZD3Q86UT5 571 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 OR5AR1Q8NGP9 310 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 OR9A1PQ8NGU1 263 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 CHAC2Q8WUX2 184 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 CSF3RQ99062 836 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 ADA2Q9NZK5 511 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 GMPR2Q9P2T1 348 aaKnown RBP16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 ZNF229Q9UJW7 825 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 SNX6Q9UNH7 406 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 A0A1W2PP18 115 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 ANGPT2O15123 496 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 LATO43561 262 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 SEC22BO75396 215 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 TBPL1P62380 186 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 TFF2Q03403 129 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 SELPLGQ14242 412 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 IMPG1Q17R60 797 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 METRNLQ641Q3 311 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 FRG2Q64ET8 278 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 ADNP2Q6IQ32 1131 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 SUSD1Q6UWL2 747 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 SLC51BQ86UW2 128 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 SYTL1Q8IYJ3 562 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 SNX19Q92543 992 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 IL17FQ96PD4 163 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 FRG2BQ96QU4 278 aa16.07■□□□□ 0.16
CAPRIN1-207ENST00000529307 PLAGL1Q9UM63 463 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms