RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 AGBL5Q8NDL9 886 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TTLQ8NG68 377 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SLC13A3Q8WWT9 602 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ADAMTS14Q8WXS8 1223 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 THOC1Q96FV9 657 aaKnown RBP11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 C3orf30Q96M34 536 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ZNF285Q96NJ3 590 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 AICDAQ9GZX7 198 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 DMRT3Q9NQL9 472 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 FGF21Q9NSA1 209 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 STARD5Q9NSY2 213 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CLCA2Q9UQC9 943 aa11.6□□□□□ -0.55
TRAF3IP2-211ENST00000528599 H3BMH7 237 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 FOXE1O00358 373 aaPredicted RBP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HDAC3O15379 428 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 NDUFS4O43181 175 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SRPX2O60687 465 aaPredicted RBP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SH3BGRLO75368 114 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CLEC3AO75596 197 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CHEK2O96017 543 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TGFB1P01137 390 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 EIF2S1P05198 315 aaKnown RBP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CCL4P13236 92 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SERPINB1P30740 379 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CSTF2P33240 577 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SNRPNP63162 240 aaKnown RBP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 COL9A2Q14055 689 aaPredicted RBP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HKDC1Q2TB90 917 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 LACTB2Q53H82 288 aaPredicted RBP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 WASHC2DQ5SRD0 308 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 C10orf62Q5T681 223 aaPredicted RBP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 VWA5B1Q5TIE3 1220 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TRIM46Q7Z4K8 759 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 DDIASQ8IXT1 998 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 KIRREL3Q8IZU9 778 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 BMPERQ8N8U9 685 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 KCT2Q8NC54 265 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TRPV3Q8NET8 790 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 OR2T11Q8NH01 316 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 OR1L3Q8NH93 324 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CCT6BQ92526 530 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 RERGQ96A58 199 aaPredicted RBP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ZNF501Q96CX3 271 aaPredicted RBP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 FAR2Q96K12 515 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 PPP1R36Q96LQ0 422 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 DEPDC7Q96QD5 511 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ELAC2Q9BQ52 826 aaKnown RBP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 MS4A8Q9BY19 250 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 NUF2Q9BZD4 464 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ACPTQ9BZG2 426 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SPRTNQ9H040 489 aaPredicted RBP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ADGRE2Q9UHX3 823 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CCL27Q9Y4X3 112 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 USH1CQ9Y6N9 552 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SERTM1A2A2V5 107 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 PMS2P1A4D2B8 440 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 FAM149AA5PLN7 773 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 EFCAB7A8K855 629 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TMEM150CB9EJG8 249 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SLCO1B7G3V0H7 640 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TMX2-CTNND1H3BSU7 103 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SERPINA6P08185 405 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 GSTM2P28161 218 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HNRNPH1P31943 449 aaKnown RBP11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 HMGCS1Q01581 520 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ZNF33BQ06732 778 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 TUBB3Q13509 450 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 PWP1Q13610 501 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 PRTGQ2VWP7 1150 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 XKR7Q5GH72 579 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 RNF165Q6ZSG1 346 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 Q6ZSR9 355 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 AFAP1L2Q8N4X5 818 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 CSNK1A1LQ8N752 337 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 RFWD2Q8NHY2 731 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 NT5CQ8TCD5 201 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 OR6C1Q96RD1 312 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 F2RL3Q96RI0 385 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SCNM1Q9BWG6 230 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 STRADBQ9C0K7 418 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 SLC6A16Q9GZN6 736 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 OR51B5Q9H339 312 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 KLHL31Q9H511 634 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 BRF2Q9HAW0 419 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 NPHS2Q9NP85 383 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 VTI1BQ9UEU0 232 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 KLK13Q9UKR3 277 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 PPT2Q9UMR5 302 aa11.59□□□□□ -0.55
TRAF3IP2-211ENST00000528599 ATP6AP2A0A1C7CYW4 349 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 A0A1W2PNU3 283 aaPredicted RBP11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 LRIT2A6NDA9 550 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 CCT8L1PA6NM43 557 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 SDHDO14521 159 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ATP6AP2O75787 350 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 TGDSO95455 350 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ALOX15P16050 662 aaPredicted RBP11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 HK2P52789 917 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 PHEXP78562 749 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 ACY1Q03154 408 aa11.58□□□□□ -0.56
TRAF3IP2-211ENST00000528599 FOXM1Q08050 763 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms