RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 ERVK-11Q9UQG0 969 aa12.55□□□□□ -0.4
RBM39-243ENST00000528062 GMPPBQ9Y5P6 360 aa12.55□□□□□ -0.4
RBM39-243ENST00000528062 DMDP11532 3685 aa12.55□□□□□ -0.4
RBM39-243ENST00000528062 CXorf51AA0A1B0GTR3 108 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 A8MX80 341 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 CLDN7O95471 211 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 CLDN9O95484 217 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 HLA-EP13747 358 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 DRD1P21728 446 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 KRT20P35900 424 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 KEAP1Q14145 624 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 GAS6Q14393 721 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 HIST2H2ACQ16777 129 aaPredicted RBP12.54□□□□□ -0.4
RBM39-243ENST00000528062 DGUOKQ16854 277 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 INO80DQ53TQ3 878 aaPredicted RBP12.54□□□□□ -0.4
RBM39-243ENST00000528062 OR4F3Q6IEY1 312 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 RETSATQ6NUM9 610 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 C22orf39Q6P5X5 142 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 ZNF852Q6ZMS4 543 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 BEND7Q8N7W2 519 aaPredicted RBP12.54□□□□□ -0.4
RBM39-243ENST00000528062 ZNF540Q8NDQ6 660 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 SETD9Q8NE22 299 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 APIPQ96GX9 242 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 PSD2Q9BQI7 771 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 HEPHQ9BQS7 1158 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 SIRT5Q9NXA8 310 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 GIN1Q9NXP7 522 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 FBXL21Q9UKT6 434 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 NDRG4Q9ULP0 352 aaKnown RBP12.54□□□□□ -0.4
RBM39-243ENST00000528062 WDR37Q9Y2I8 494 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 TPRKBQ9Y3C4 175 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 TRBV5-4A0A0C4DH59 114 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 KRT87PA6NCN2 255 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 CCNDBP1O95273 360 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 SEMG1P04279 462 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 LCKP06239 509 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 SRPRAP08240 638 aaKnown RBP12.54□□□□□ -0.4
RBM39-243ENST00000528062 BPIP17213 487 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 TIE1P35590 1138 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 TGFBR2P37173 567 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 SEMG2Q02383 582 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 MAD2L1BPQ15013 274 aaPredicted RBP12.54□□□□□ -0.4
RBM39-243ENST00000528062 CHRNA6Q15825 494 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 CDKN3Q16667 212 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 C2orf27AQ580R0 203 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 ARMC12Q5T9G4 340 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 LINC00299Q6ZSB3 139 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 ADCK1Q86TW2 530 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 RNF175Q8N4F7 328 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 ZNF513Q8N8E2 541 aaPredicted RBP12.54□□□□□ -0.4
RBM39-243ENST00000528062 TTC29Q8NA56 475 aaPredicted RBP12.54□□□□□ -0.4
RBM39-243ENST00000528062 IL17RCQ8NAC3 791 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 SELENOMQ8WWX9 145 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 TBC1D20Q96BZ9 403 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 SLC29A3Q9BZD2 475 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 ZFYVE1Q9HBF4 777 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 TM9SF3Q9HD45 589 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 RASSF1Q9NS23 344 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 C2orf42Q9NWW7 574 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 PNMA8BQ9ULN7 279 aaPredicted RBP12.54□□□□□ -0.4
RBM39-243ENST00000528062 VPS13AQ96RL7 3174 aa12.54□□□□□ -0.4
RBM39-243ENST00000528062 KCNE1BA0A087WTH5 132 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 UPK3BL1B0FP48 263 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 UPK3BL2E5RIL1 263 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 RFXANKO14593 260 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 PRAMEF4O60810 478 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 WBP4O75554 376 aaKnown RBP12.53□□□□□ -0.4
RBM39-243ENST00000528062 KRT6AP02538 564 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 KRT6BP04259 564 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 KRT6CP48668 564 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 CXCR4P61073 352 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 MAPK11Q15759 364 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 PRAMEF9Q5VWM5 478 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 ZCCHC8Q6NZY4 707 aaKnown RBP12.53□□□□□ -0.4
RBM39-243ENST00000528062 MACC1Q6ZN28 852 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 Q6ZVU0 165 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 DNAJB8Q8NHS0 232 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 PHF10Q8WUB8 498 aaKnown RBP12.53□□□□□ -0.4
RBM39-243ENST00000528062 HHIPQ96QV1 700 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 DPH2Q9BQC3 489 aaPredicted RBP12.53□□□□□ -0.4
RBM39-243ENST00000528062 RMND5AQ9H871 391 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 TBC1D17Q9HA65 648 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 PRDM8Q9NQV8 689 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 AASDHPPTQ9NRN7 309 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 PDP1Q9P0J1 537 aaPredicted RBP12.53□□□□□ -0.4
RBM39-243ENST00000528062 SLC25A13Q9UJS0 675 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 SAMD4AQ9UPU9 718 aaKnown RBP12.53□□□□□ -0.4
RBM39-243ENST00000528062 MAN2B1O00754 1011 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 RGS10O43665 173 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 CNOT3O75175 753 aaKnown RBP12.53□□□□□ -0.4
RBM39-243ENST00000528062 ITGALP20701 1170 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 HNF1BP35680 557 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 WASP42768 502 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 AGAP7PQ5VUJ5 663 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 PLEKHG7Q6ZR37 379 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 ZZZ3Q8IYH5 903 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 APH1BQ8WW43 257 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 EDAQ92838 391 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 TESCQ96BS2 214 aa12.53□□□□□ -0.4
RBM39-243ENST00000528062 LGALS12Q96DT0 336 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms