RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 A0A1W2PQ67 120 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 NEMP2A6NFY4 417 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 PCNX2A6NKB5 2137 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 SRRM3A6NNA2 597 aaPredicted RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 C1QTNF3-AMACRE9PGA6 284 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 H3BMM5 538 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 K7ESM1 405 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 PRMT5O14744 637 aaPredicted RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 MID1O15344 667 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 ITM2AO43736 263 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 ZBTB14O43829 449 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 EDF1O60869 148 aaKnown RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 DIAPH2O60879 1101 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 SLC43A1O75387 559 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 MTX2O75431 263 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 KLHL2O95198 593 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 TRIM16O95361 564 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 WISP3O95389 354 aaPredicted RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 KLF8O95600 359 aaPredicted RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 APBB3O95704 486 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 FAM107AO95990 144 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 DNTTP04053 509 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 GSTA1P08263 222 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 ELFN1P0C7U0 828 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 MYL2P10916 166 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 ADRB3P13945 408 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 CPA3P15088 417 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 IL9P15248 144 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 ZNF24P17028 368 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 JUNBP17275 347 aaPredicted RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 GM2AP17900 193 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 EGR1P18146 543 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 TFEBP19484 476 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 CD72P21854 359 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 RPS3P23396 243 aaKnown RBP eCLIP4.05□□□□□ -1.76
CD44-226ENST00000527889 ACRV1P26436 265 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 ARRB2P32121 409 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 P2RY2P41231 377 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 PTGER3P43115 390 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 TNFRSF4P43489 277 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 CCR10P46092 362 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 POLD2P49005 469 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 MAN2A2P49641 1150 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 NR1H2P55055 460 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 UCP3P55916 312 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 POU6F2P78424 691 aaPredicted RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 DUSP2Q05923 314 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 BST1Q10588 318 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 ITGA9Q13797 1035 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 PUM1Q14671 1186 aaKnown RBP eCLIP4.05□□□□□ -1.76
CD44-226ENST00000527889 RCN1Q15293 331 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 MAPKAPK3Q16644 382 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 TECRLQ5HYJ1 363 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 AARS2Q5JTZ9 985 aaKnown RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 SH2D4BQ5SQS7 431 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 ZNF648Q5T619 568 aaPredicted RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 GPRC6AQ5T6X5 926 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 PIP5KL1Q5T9C9 394 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 FAM219BQ5XKK7 198 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 GPR139Q6DWJ6 353 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 C11orf88Q6PI97 169 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 NAPRTQ6XQN6 538 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 KYAT3Q6YP21 454 aaKnown RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 RGS9BPQ6ZS82 235 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 SEM1Q6ZVN7 128 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 ERN2Q76MJ5 926 aaKnown RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 DET1Q7L5Y6 550 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 OTOAQ7RTW8 1153 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 B3GNT8Q7Z7M8 397 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 FSTL5Q8N475 847 aaPredicted RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 SLC44A3Q8N4M1 653 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 AADATQ8N5Z0 425 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 SLC15A4Q8N697 577 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 CLDN19Q8N6F1 224 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 KDM1BQ8NB78 822 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 SIDT2Q8NBJ9 832 aaKnown RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 TXNDC5Q8NBS9 432 aaKnown RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 OR1N1Q8NGS0 311 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 ZNF398Q8TD17 642 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 CD200R1Q8TD46 325 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 GANCQ8TET4 914 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 FAM168AQ92567 244 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 HTRA1Q92743 480 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 KLK6Q92876 244 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 PTERQ96BW5 349 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 NRBF2Q96F24 287 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 LRIG1Q96JA1 1093 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 BIRC8Q96P09 236 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 RBM14Q96PK6 669 aaKnown RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 PRPF18Q99633 342 aaKnown RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 MYOCQ99972 504 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 RIOK2Q9BVS4 552 aaKnown RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 PHF7Q9BWX1 381 aaPredicted RBP4.05□□□□□ -1.76
CD44-226ENST00000527889 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 C20orf27Q9GZN8 174 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 CLPBQ9H078 707 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 ALG9Q9H6U8 611 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 NMRAL1Q9HBL8 299 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 DYRK4Q9NR20 520 aa4.05□□□□□ -1.76
CD44-226ENST00000527889 RLIMQ9NVW2 624 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms