RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PER3P56645 1201 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 MAT1AQ00266 395 aaKnown RBP13.41□□□□□ -0.26
CAPN1-212ENST00000527887 CDKL1Q00532 357 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 CSHL1Q14406 222 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 EXT1Q16394 746 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 MINDY4Q4G0A6 757 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 ABHD17BQ5VST6 288 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 FAAH2Q6GMR7 532 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 MBOAT1Q6ZNC8 495 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 MAMDC2Q7Z304 686 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-212ENST00000527887 MTERF4Q7Z6M4 381 aaKnown RBP13.41□□□□□ -0.26
CAPN1-212ENST00000527887 AFAP1L2Q8N4X5 818 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 PLPP5Q8NEB5 264 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 CATSPER1Q8NEC5 780 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 DNAJB8Q8NHS0 232 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 ALKBH8Q96BT7 664 aaKnown RBP13.41□□□□□ -0.26
CAPN1-212ENST00000527887 CFAP36Q96G28 342 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 MOCS1Q9NZB8 636 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 CHMP2BQ9UQN3 213 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 POLEQ07864 2286 aa13.41□□□□□ -0.26
CAPN1-212ENST00000527887 CENPEQ02224 2701 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 URADA6NGE7 173 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 SGK494L7N484 410 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 IL1RNP18510 177 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 HNMTP50135 292 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 VSNL1P62760 191 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 MEF2AQ02078 507 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-212ENST00000527887 RGS1Q08116 209 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 MFSD4BQ5TF39 518 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 H3F3CQ6NXT2 135 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 EMBQ6PCB8 327 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 TRMT10BQ6PF06 316 aaKnown RBP13.4□□□□□ -0.26
CAPN1-212ENST00000527887 SPNS2Q8IVW8 549 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 SIRT6Q8N6T7 355 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 KCT2Q8NC54 265 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 TRPV3Q8NET8 790 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 M1APQ8TC57 530 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 NT5CQ8TCD5 201 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 PYCR2Q96C36 320 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 VPS39Q96JC1 886 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 ZNF354BQ96LW1 612 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 OLFM1Q99784 485 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 SLX1AQ9BQ83 275 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.4□□□□□ -0.26
CAPN1-212ENST00000527887 POPDC3Q9HBV1 291 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 OLAHQ9NV23 265 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 STMN3Q9NZ72 180 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 ZFP69BQ9UJL9 534 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 NAALAD2Q9Y3Q0 740 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 PCDHGB6Q9Y5F9 930 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 KCNE2Q9Y6J6 123 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 NOTCH2Q04721 2471 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 CNTRLQ7Z7A1 2325 aa13.4□□□□□ -0.26
CAPN1-212ENST00000527887 A0A1B0GUH1 482 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 OR5H15A6NDH6 313 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 MAGEB17A8MXT2 336 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 E7ESA3 106 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 E2F3O00716 465 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 TTI1O43156 1089 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 NDUFS4O43181 175 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 OR1F1O43749 312 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 JRKO75564 520 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 CRYABP02511 175 aaKnown RBP13.39□□□□□ -0.27
CAPN1-212ENST00000527887 ITGAMP11215 1152 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 ZNF37AP17032 561 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-212ENST00000527887 ALOX12P18054 663 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 JAK1P23458 1154 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 SCTRP47872 440 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 GUCY2DQ02846 1103 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 CAV1Q03135 178 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 ZXDCQ2QGD7 858 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-212ENST00000527887 ZNF324BQ6AW86 544 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-212ENST00000527887 SBSNQ6UWP8 590 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 ABHD13Q7L211 337 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 PRSS41Q7RTY9 318 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 ANKRD37Q7Z713 158 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 ZC3HC1Q86WB0 502 aaKnown RBP13.39□□□□□ -0.27
CAPN1-212ENST00000527887 SLC5A11Q8WWX8 675 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 PKNOX2Q96KN3 472 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 OR4K3Q96R72 315 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 MACROD1Q9BQ69 325 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 AIF1LQ9BQI0 150 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 WDR83Q9BRX9 315 aaKnown RBP13.39□□□□□ -0.27
CAPN1-212ENST00000527887 TSPYL1Q9H0U9 437 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 PELI2Q9HAT8 420 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 PLA2G3Q9NZ20 509 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 HCN3Q9P1Z3 774 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 ABI3Q9P2A4 366 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 SH2B3Q9UQQ2 575 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 DYRK1BQ9Y463 629 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 NUP210LQ5VU65 1888 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 HIVEP3Q5T1R4 2406 aa13.39□□□□□ -0.27
CAPN1-212ENST00000527887 ICE1Q9Y2F5 2266 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 HEATR5BQ9P2D3 2071 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 GALR3O60755 368 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-212ENST00000527887 PRAMEF2O60811 474 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 SEC24DO94855 1032 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-212ENST00000527887 RASAL1O95294 804 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 GUCA1CO95843 209 aa13.38□□□□□ -0.27
CAPN1-212ENST00000527887 WDPCPO95876 746 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms